Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 HMGB1P18-201ENST00000438801 619 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 HMGN2P9-201ENST00000476875 229 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-948P-201ENST00000516374 107 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-1198P-201ENST00000516904 67 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 AC016925.2-201ENST00000605108 242 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 AC006504.8-201ENST00000621046 635 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 AC008873.1-201ENST00000625051 138 ntBASIC1.37□□□□□ -2.19
KLHDC3Q9BQ90 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 ZNF204P-201ENST00000416749 2397 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-862P-201ENST00000362804 105 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-338P-201ENST00000383888 105 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-296P-201ENST00000384608 107 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 MIR32-201ENST00000384965 70 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 MIR549A-201ENST00000385268 96 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 MTND4LP16-201ENST00000440828 295 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-344P-201ENST00000516635 111 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 MIR4524B-201ENST00000581569 115 ntBASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHDC3Q9BQ90 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-137P-201ENST00000363680 108 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-1019P-201ENST00000364424 107 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 Y_RNA.319-201ENST00000365138 92 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-831P-201ENST00000384548 107 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 MIR520A-201ENST00000384862 85 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 MIR487A-201ENST00000385009 80 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 MIR153-2-201ENST00000385225 87 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AL117342.1-201ENST00000404861 406 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 MIR1277-201ENST00000408536 78 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 MIR548F1-201ENST00000408667 84 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-1148P-201ENST00000410992 104 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AC060773.1-201ENST00000421698 310 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 Z82188.1-201ENST00000436709 154 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 snoU13.30-201ENST00000458951 104 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AC025465.3-201ENST00000510570 311 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AC011406.1-201ENST00000512440 370 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 uc_338.5-201ENST00000611839 155 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KLHDC3Q9BQ90 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNU1-96P-201ENST00000364163 162 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-1305P-201ENST00000364353 104 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-596P-201ENST00000365395 98 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 SNORA67.2-201ENST00000384300 149 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 EBAG9P1-201ENST00000418955 543 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 CST2P1-201ENST00000425770 87 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 MTATP6P13-201ENST00000438531 667 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 MTND1P17-201ENST00000448961 204 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-1041P-201ENST00000516254 102 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNA5SP384-201ENST00000516615 116 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNU6-273P-201ENST00000516937 96 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 RNA5SP454-201ENST00000517231 127 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 SNORA59B-202ENST00000578183 701 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 MIR5696-201ENST00000578474 85 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 7SK.7-201ENST00000603504 247 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 SNORD11B-201ENST00000607707 90 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AC093913.1-201ENST00000614178 329 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AL353997.5-201ENST00000618886 171 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AL078596.1-201ENST00000624856 447 ntBASIC1.34□□□□□ -2.19
KLHDC3Q9BQ90 AC010615.1-201ENST00000594254 1764 ntBASIC1.34□□□□□ -2.2
KLHDC3Q9BQ90 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 MIR424-201ENST00000362227 98 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-439P-201ENST00000384188 106 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-306P-201ENST00000384617 107 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
KLHDC3Q9BQ90 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms