Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 RNU4-9P-201ENST00000364951 139 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 RNU6-1013P-201ENST00000384180 107 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 MIR32-201ENST00000384965 70 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 SNORD115-47-201ENST00000391226 86 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 RNU2-7P-201ENST00000410794 178 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.43□□□□□ -2.18
CITED1Q99966 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 AL513185.2-201ENST00000425543 193 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 UBE2V1P8-201ENST00000437166 265 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 MTND4LP16-201ENST00000440828 295 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 AC074290.1-201ENST00000448883 135 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 snoU13.9-201ENST00000458927 103 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 HMGN1P13-201ENST00000505795 138 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 SUB1P3-201ENST00000564581 315 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 7SK.7-201ENST00000603504 247 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 MIR3662-201ENST00000637030 95 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 BX322639.1-202ENST00000423987 2213 ntBASIC1.43□□□□□ -2.18
CITED1Q99966 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.42□□□□□ -2.18
CITED1Q99966 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CITED1Q99966 Y_RNA.135-201ENST00000363439 95 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 Y_RNA.157-201ENST00000363638 102 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU1-96P-201ENST00000364163 162 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU6-534P-201ENST00000364877 106 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 MIR487A-201ENST00000385009 80 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNA5SP118-201ENST00000410385 109 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AL358453.1-201ENST00000422522 250 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 MTND1P34-201ENST00000438556 671 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AC092473.1-201ENST00000441098 221 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AC016717.1-201ENST00000448918 286 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AC079354.2-201ENST00000453523 154 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AC092989.1-201ENST00000481235 277 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 MTCYBP18-201ENST00000501056 747 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNA5SP445-201ENST00000515889 115 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU2-34P-201ENST00000516534 121 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU6-1198P-201ENST00000516904 67 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNA5SP54-201ENST00000516951 92 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 RNU6-1314P-201ENST00000517139 104 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.42□□□□□ -2.18
CITED1Q99966 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AC069114.2-201ENST00000604699 304 ntBASIC1.42□□□□□ -2.18
CITED1Q99966 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.42□□□□□ -2.18
CITED1Q99966 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CITED1Q99966 RNU6-296P-201ENST00000384608 107 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 RNU6-306P-201ENST00000384617 107 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 MIR499A-201ENST00000384903 122 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 RNU2-20P-201ENST00000410425 191 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.41□□□□□ -2.18
CITED1Q99966 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.41□□□□□ -2.18
CITED1Q99966 RPL36AP21-201ENST00000490372 323 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 AC005840.1-201ENST00000498412 377 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 AC011406.1-201ENST00000512440 370 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 TRMT112P2-201ENST00000512910 132 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.41□□□□□ -2.18
CITED1Q99966 Y_RNA.655-201ENST00000515919 96 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 RNU6-718P-201ENST00000516166 105 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 RNU6-856P-201ENST00000516959 98 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.41□□□□□ -2.18
CITED1Q99966 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CITED1Q99966 MIR4273-201ENST00000582824 84 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 MIR3942-201ENST00000585264 109 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 AC090517.2-201ENST00000614966 680 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 MIR8070-201ENST00000616510 88 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.41□□□□□ -2.18
CITED1Q99966 RNU6-414P-201ENST00000363705 104 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 RNU6-975P-201ENST00000384296 105 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 RNU6-541P-201ENST00000384709 110 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 MIR520A-201ENST00000384862 85 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 MIR153-2-201ENST00000385225 87 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 AC004866.1-201ENST00000411748 78 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.4□□□□□ -2.19
CITED1Q99966 AC060773.1-201ENST00000421698 310 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.4□□□□□ -2.19
CITED1Q99966 AC099677.2-201ENST00000436385 175 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 snoU13.30-201ENST00000458951 104 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 RPS29P11-201ENST00000496507 171 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 RNU6-864P-201ENST00000516256 108 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 RNA5SP384-201ENST00000516615 116 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 RNU1-117P-201ENST00000517041 158 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.4□□□□□ -2.19
CITED1Q99966 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.4□□□□□ -2.19
CITED1Q99966 MIR502-201ENST00000606349 86 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 MIR8081-201ENST00000611533 95 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.4□□□□□ -2.19
CITED1Q99966 MIR3688-2-201ENST00000636963 87 ntBASIC1.4□□□□□ -2.19
CITED1Q99966 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CITED1Q99966 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 Y_RNA.6-201ENST00000362350 114 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 RNU6-1019P-201ENST00000364424 107 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 Y_RNA.269-201ENST00000364685 89 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 Y_RNA.508-201ENST00000384502 114 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 RNU6-1235P-201ENST00000384559 107 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 MIR586-201ENST00000385035 97 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms