Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 AC022513.1-201ENST00000624512 117 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 Y_RNA.160-201ENST00000363677 92 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-137P-201ENST00000363680 108 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-593P-201ENST00000364716 112 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-767P-201ENST00000384132 107 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-17P-201ENST00000384245 107 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-975P-201ENST00000384296 105 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 Y_RNA.490-201ENST00000384413 102 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-18P-201ENST00000384527 107 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 MIR586-201ENST00000385035 97 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 MTND1P2-201ENST00000430604 821 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.65□□□□□ -2.15
SSX3Q99909 AC016717.1-201ENST00000448918 286 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 HMGN2P9-201ENST00000476875 229 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 SNORA25.14-201ENST00000516481 132 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU6-344P-201ENST00000516635 111 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 RNU1-117P-201ENST00000517041 158 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 AC027288.2-201ENST00000553028 243 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 SUB1P4-201ENST00000566062 339 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 AC011494.1-201ENST00000596454 237 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.65□□□□□ -2.15
SSX3Q99909 AC018462.2-201ENST00000605375 395 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
SSX3Q99909 Y_RNA.783-201ENST00000613546 102 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 MIR7843-201ENST00000622274 79 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 AL078596.1-201ENST00000624856 447 ntBASIC1.65□□□□□ -2.15
SSX3Q99909 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SSX3Q99909 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSX3Q99909 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SSX3Q99909 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
SSX3Q99909 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
SSX3Q99909 Y_RNA.48-201ENST00000362710 103 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 RNU6-595P-201ENST00000363944 107 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 RNU6-1235P-201ENST00000384559 107 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 RNU6-876P-201ENST00000391295 104 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.64□□□□□ -2.15
SSX3Q99909 USMG5P1-201ENST00000425964 177 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 AL445305.1-201ENST00000432577 575 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 RNU6-498P-201ENST00000459468 107 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 AC026782.1-201ENST00000512952 449 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 RNU6-1041P-201ENST00000516254 102 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 RNU7-30P-201ENST00000516835 62 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 AC134698.4-201ENST00000523451 826 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 DEFB122-202ENST00000569013 197 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 MIR3124-201ENST00000582636 67 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 SNORD11B-201ENST00000607707 90 ntBASIC1.64□□□□□ -2.15
SSX3Q99909 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.64□□□□□ -2.15
SSX3Q99909 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SSX3Q99909 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.64□□□□□ -2.15
SSX3Q99909 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
SSX3Q99909 Y_RNA.2-201ENST00000362330 96 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 RNU6-862P-201ENST00000362804 105 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 RNU6-873P-201ENST00000363833 107 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 RNU6-280P-201ENST00000364145 104 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 Y_RNA.405-201ENST00000383979 100 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 Y_RNA.451-201ENST00000384200 100 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 Y_RNA.473-201ENST00000384333 102 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 RNU6-601P-201ENST00000384540 107 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 Y_RNA.524-201ENST00000384564 100 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 Y_RNA.561-201ENST00000384694 100 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SSX3Q99909 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 MIR1289-2-201ENST00000408360 111 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 RPL37P10-201ENST00000412884 288 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 AC060773.1-201ENST00000421698 310 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 AP003033.1-201ENST00000527244 415 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 CBX3P8-201ENST00000532412 525 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.63□□□□□ -2.15
SSX3Q99909 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 AC092881.1-201ENST00000638218 2733 ntBASIC1.63□□□□□ -2.15
SSX3Q99909 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SSX3Q99909 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SSX3Q99909 RNU6-661P-201ENST00000362409 107 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 RNU5F-3P-201ENST00000363767 117 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 MT-TL1-201ENST00000386347 75 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 RNU6-159P-201ENST00000391080 106 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 Y_RNA.594-201ENST00000410373 140 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 RNU6-1050P-201ENST00000410388 107 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 RPL21P111-201ENST00000418453 477 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 MTCO3P29-201ENST00000432119 779 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 RNU7-57P-201ENST00000459540 60 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 RPL31P58-201ENST00000469001 379 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 AC011406.1-201ENST00000512440 370 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 Y_RNA.706-201ENST00000516933 99 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 Y_RNA.708-201ENST00000516950 96 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 UBL5P4-201ENST00000562584 236 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 AC069114.2-201ENST00000604699 304 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 AL359757.2-201ENST00000624309 274 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 AC008873.1-201ENST00000625051 138 ntBASIC1.62□□□□□ -2.15
SSX3Q99909 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
SSX3Q99909 RNU6-845P-201ENST00000362578 103 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RNU1-62P-201ENST00000362599 164 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RNU1-96P-201ENST00000364163 162 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 Y_RNA.279-201ENST00000364763 95 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms