Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RNU6-307P-201ENST00000516743 106 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.04□□□□□ -2.08
RAD9AQ99638 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.04□□□□□ -2.08
RAD9AQ99638 LARP7P1-201ENST00000605576 316 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 AC005014.2-201ENST00000607795 599 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 RMST_6.1-201ENST00000611980 203 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 AC022202.1-201ENST00000613515 211 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.04□□□□□ -2.08
RAD9AQ99638 AC084768.2-201ENST00000622736 221 ntBASIC2.04□□□□□ -2.08
RAD9AQ99638 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAD9AQ99638 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 ZNF702P-202ENST00000434269 1966 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 RNY1P16-201ENST00000363063 111 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 RNY1P10-201ENST00000363268 113 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 RNU5E-4P-201ENST00000364931 120 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 Y_RNA.405-201ENST00000383979 100 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 Y_RNA.451-201ENST00000384200 100 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 Y_RNA.524-201ENST00000384564 100 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 RNU6-310P-201ENST00000384655 107 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 Y_RNA.561-201ENST00000384694 100 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 MIR153-2-201ENST00000385225 87 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 MIR549A-201ENST00000385268 96 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AL627390.1-201ENST00000396055 340 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 Y_RNA.646-201ENST00000410980 101 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AP1B1P2-201ENST00000416196 106 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 MTCO3P29-201ENST00000432119 779 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AL353997.1-201ENST00000432936 108 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AL035666.1-201ENST00000446195 348 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
RAD9AQ99638 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.03□□□□□ -2.08
RAD9AQ99638 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.03□□□□□ -2.08
RAD9AQ99638 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AC007215.1-201ENST00000464893 276 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AL163540.1-201ENST00000485382 386 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.03□□□□□ -2.08
RAD9AQ99638 AC107393.1-201ENST00000512403 346 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.03□□□□□ -2.08
RAD9AQ99638 AL359821.1-201ENST00000605519 182 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
RAD9AQ99638 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RAD9AQ99638 MTND4LP32-201ENST00000636111 270 ntBASIC2.03□□□□□ -2.08
RAD9AQ99638 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAD9AQ99638 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RAD9AQ99638 RNA5SP276-201ENST00000362580 94 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 SNORA18.2-201ENST00000383865 132 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 MIR499A-201ENST00000384903 122 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 MT-TD-201ENST00000387419 68 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 SNORA12.2-201ENST00000391040 156 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 HMGN2P39-201ENST00000398005 273 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.02□□□□□ -2.09
RAD9AQ99638 SNRPEP8-201ENST00000442866 260 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 RPL30P15-201ENST00000457129 321 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 Y_RNA.653-201ENST00000459091 95 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 TOMM22P6-201ENST00000465035 409 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AC097473.1-201ENST00000508142 408 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AC093259.1-201ENST00000509755 300 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 MTND3P22-201ENST00000510932 243 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 TRMT112P2-201ENST00000512910 132 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 RNU5F-4P-201ENST00000516581 114 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 RNU6-1098P-201ENST00000516772 96 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 RNU6-250P-201ENST00000516958 103 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AC093027.1-201ENST00000546698 429 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AC026470.2-201ENST00000561492 181 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 SUB1P3-201ENST00000564581 315 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 MIR5701-3-201ENST00000578890 82 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 MIR5701-1-201ENST00000585138 82 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.02□□□□□ -2.09
RAD9AQ99638 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 MIR5701-2-201ENST00000615634 82 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 AL359314.1-201ENST00000616913 261 ntBASIC2.02□□□□□ -2.09
RAD9AQ99638 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RAD9AQ99638 Y_RNA.67-201ENST00000362870 100 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNU1-76P-201ENST00000362903 159 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 Y_RNA.99-201ENST00000363138 105 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNU4-73P-201ENST00000363164 141 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 Y_RNA.259-201ENST00000364619 101 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 Y_RNA.319-201ENST00000365138 92 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNU6-17P-201ENST00000384245 107 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 SNORD14D-201ENST00000384390 87 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNU6-18P-201ENST00000384527 107 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNU6-541P-201ENST00000384709 110 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 SNORA67.5-201ENST00000391036 107 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 MTCYBP4-201ENST00000401524 249 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 MIR1262-201ENST00000408276 93 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 RNU4-62P-201ENST00000410125 130 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 Y_RNA.604-201ENST00000410574 102 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.01□□□□□ -2.09
RAD9AQ99638 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 AL353689.1-201ENST00000438895 199 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 HMGN2P18-201ENST00000450680 270 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 Y_RNA.632-201ENST00000459189 102 ntBASIC2.01□□□□□ -2.09
RAD9AQ99638 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms