Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR3124-201ENST00000582636 67 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS35Q96QK1 MIR8063-201ENST00000621930 81 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
VPS35Q96QK1 ICE2P2-201ENST00000483823 2787 ntBASIC1.41□□□□□ -2.18
VPS35Q96QK1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
VPS35Q96QK1 Y_RNA.38-201ENST00000362617 102 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 RNU6-271P-201ENST00000363858 105 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 RNU4-24P-201ENST00000364565 139 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 RNU4-75P-201ENST00000364621 146 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 AL590002.1-201ENST00000406554 418 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS35Q96QK1 AL590632.1-201ENST00000424289 371 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 Z82205.1-201ENST00000428456 297 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 MTCO3P18-201ENST00000440206 761 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 PCMTD1P1-201ENST00000455560 355 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 RNU6-506P-201ENST00000516553 94 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 AC245505.1-201ENST00000556398 224 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VPS35Q96QK1 AC006001.4-201ENST00000622243 395 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 AC008873.1-201ENST00000625051 138 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS35Q96QK1 MIR1321-201ENST00000637766 79 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS35Q96QK1 AC099654.12-201ENST00000639868 649 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.19
VPS35Q96QK1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS35Q96QK1 MIR302D-201ENST00000362275 68 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 RNA5SP432-201ENST00000362480 116 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 Y_RNA.41-201ENST00000362646 102 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 SNORA33-201ENST00000363664 130 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 SNORA72.2-201ENST00000365028 127 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 Y_RNA.517-201ENST00000384551 106 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS35Q96QK1 HMGN2P34-201ENST00000437647 269 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 DAP3P1-201ENST00000441522 278 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 AC093534.1-201ENST00000504977 132 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 RNA5SP445-201ENST00000515889 115 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 RNU6-314P-201ENST00000516574 104 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS35Q96QK1 AC023043.2-201ENST00000589678 1026 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 AL138726.1-201ENST00000614873 333 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 AL078596.1-201ENST00000624856 447 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 AC095038.3-201ENST00000634439 195 ntBASIC1.39□□□□□ -2.19
VPS35Q96QK1 RNU1-62P-201ENST00000362599 164 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RNU6-1090P-201ENST00000364065 94 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RNU6-57P-201ENST00000411348 103 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 MTND1P11-201ENST00000456661 876 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS35Q96QK1 RN7SKP210-201ENST00000459176 261 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 snoU13.27-201ENST00000459278 104 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RNU7-57P-201ENST00000459540 60 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RPS26P55-201ENST00000471178 356 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 MTCO2P30-201ENST00000503662 364 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RNU6-344P-201ENST00000516635 111 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RNU6-256P-201ENST00000516747 97 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 RNU1-117P-201ENST00000517041 158 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 POLR3GP2-201ENST00000588366 668 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 AF250324.2-201ENST00000608299 610 ntBASIC1.38□□□□□ -2.19
VPS35Q96QK1 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 RNU4-9P-201ENST00000364951 139 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 SNORA67.2-201ENST00000384300 149 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 RNU6-331P-201ENST00000384724 107 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 MIR517A-201ENST00000385001 87 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 AL161935.2-201ENST00000414627 60 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 ZNF885P-201ENST00000420174 1098 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.37□□□□□ -2.19
VPS35Q96QK1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS35Q96QK1 MTND3P21-201ENST00000433774 331 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 AC073910.1-201ENST00000445047 438 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 AC245517.4-201ENST00000448601 281 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS35Q96QK1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 RNA5SP54-201ENST00000516951 92 ntBASIC1.37□□□□□ -2.19
VPS35Q96QK1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS35Q96QK1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS35Q96QK1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 SNORD115-8-201ENST00000363856 82 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 SNORD115-32-201ENST00000364079 82 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 SNORD1A-201ENST00000364968 72 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 SNORD115-38-201ENST00000365037 82 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 RNU6-245P-201ENST00000384020 107 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 RNU6-417P-201ENST00000384712 107 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 MIR515-2-201ENST00000384883 83 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms