Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC083806.3-201ENST00000614016 455 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AC090517.2-201ENST00000614966 680 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 FER-210ENST00000628534 558 ntTSL 5 BASIC1.21□□□□□ -2.22
COL21A1Q96P44 AL159152.1-201ENST00000635019 2587 ntBASIC1.21□□□□□ -2.22
COL21A1Q96P44 OR4G1P-203ENST00000641984 1631 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.6-201ENST00000362350 114 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.9-201ENST00000362354 101 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RNY4P14-201ENST00000363656 96 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.167-201ENST00000363735 109 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RNY3P3-201ENST00000363816 102 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.231-201ENST00000364358 102 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.402-201ENST00000383972 102 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 SNORD115-47-201ENST00000391226 86 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.599-201ENST00000410489 109 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 Y_RNA.619-201ENST00000410951 90 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RPS26P42-201ENST00000413485 326 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.2□□□□□ -2.22
COL21A1Q96P44 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC067942.3-201ENST00000512025 362 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC011352.1-201ENST00000512300 793 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RNU6-718P-201ENST00000516166 105 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RNU6-856P-201ENST00000516959 98 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC109635.3-201ENST00000529536 185 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC010525.2-201ENST00000590920 195 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC092807.2-201ENST00000609367 243 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 RMST_3.1-201ENST00000611651 109 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC084782.3-201ENST00000612282 578 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC022709.1-201ENST00000615967 87 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 U4.5-201ENST00000617137 123 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 SNORA43.4-201ENST00000629559 138 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 AC010615.1-201ENST00000594254 1764 ntBASIC1.2□□□□□ -2.22
COL21A1Q96P44 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL21A1Q96P44 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 RNU6-522P-201ENST00000364497 107 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 Y_RNA.256-201ENST00000364594 104 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 POLR2J4-204ENST00000418424 324 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 MTCO3P29-201ENST00000432119 779 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 U8.21-201ENST00000459536 136 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 RNU6-1208P-201ENST00000459588 107 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 SNORA14.1-201ENST00000516113 141 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 RNU6-189P-201ENST00000516120 101 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 SNORA77B-201ENST00000578179 125 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC092747.3-201ENST00000603769 301 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 RNU6-89P-201ENST00000606519 100 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 DISC2.1-201ENST00000612827 205 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC103705.1-201ENST00000619013 241 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC091895.1-201ENST00000624494 256 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.19□□□□□ -2.22
COL21A1Q96P44 MIR3688-2-201ENST00000636963 87 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC024614.3-201ENST00000637860 256 ntBASIC1.19□□□□□ -2.22
COL21A1Q96P44 AC009541.1-201ENST00000438279 2662 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL21A1Q96P44 RNU6-227P-201ENST00000362865 103 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 Y_RNA.89-201ENST00000363031 102 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 Y_RNA.205-201ENST00000364128 113 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 RNU6-534P-201ENST00000364877 106 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 Y_RNA.295-201ENST00000364918 102 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 SNORA72.2-201ENST00000365028 127 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 RNU6-439P-201ENST00000384188 106 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 RNU6-342P-201ENST00000384521 104 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 MIR515-2-201ENST00000384883 83 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 MIR515-1-201ENST00000384884 83 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 Y_RNA.615-201ENST00000410769 117 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 FCF1P9-201ENST00000412546 282 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.18□□□□□ -2.22
COL21A1Q96P44 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.18□□□□□ -2.22
COL21A1Q96P44 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 HMGN2P26-201ENST00000463169 339 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC114982.1-201ENST00000469402 321 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC092989.1-201ENST00000481235 277 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC083904.1-201ENST00000487828 231 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 Y_RNA.654-201ENST00000497848 106 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC091885.1-201ENST00000506658 268 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.18□□□□□ -2.22
COL21A1Q96P44 AL121757.2-201ENST00000611223 313 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AC122108.2-201ENST00000611946 526 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.18□□□□□ -2.22
COL21A1Q96P44 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms