Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AL132822.1-201ENST00000617063 513 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AC137590.2-201ENST00000619709 240 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 MIR7111-201ENST00000619751 72 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNY1P16-201ENST00000363063 111 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 U3.9-201ENST00000363823 204 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.187-201ENST00000363918 113 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNU6-611P-201ENST00000384276 104 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.535-201ENST00000384612 99 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 SNORA12.2-201ENST00000391040 156 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 SNORA12-201ENST00000391162 147 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNU6-321P-201ENST00000410912 106 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 MTCO2P27-201ENST00000420740 428 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AL590556.1-201ENST00000423231 483 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AC236972.2-201ENST00000434979 310 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AL163540.1-201ENST00000485382 386 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.675-201ENST00000516389 149 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 RNU6-667P-201ENST00000517186 102 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AC233702.2-202ENST00000562547 291 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 SUB1P3-201ENST00000564581 315 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AC005034.5-201ENST00000604219 466 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AL050343.2-201ENST00000607338 280 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AC084781.2-201ENST00000615568 161 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 AL162373.1-201ENST00000620433 407 ntBASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
NECTIN4Q96NY8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
NECTIN4Q96NY8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2□□□□□ -2.09
NECTIN4Q96NY8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNU6-137P-201ENST00000363680 108 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNU6-457P-201ENST00000363999 107 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 MIR487A-201ENST00000385009 80 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 MIR559-201ENST00000385188 96 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 MIR208B-201ENST00000401172 77 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNU2-32P-201ENST00000411193 191 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RPL30P15-201ENST00000457129 321 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RPL17P19-201ENST00000489069 552 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
NECTIN4Q96NY8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNU6-470P-201ENST00000515954 104 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNU6-120P-201ENST00000516077 103 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 RNU6-307P-201ENST00000516743 106 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2□□□□□ -2.09
NECTIN4Q96NY8 AL133255.1-201ENST00000606374 441 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
NECTIN4Q96NY8 AC126177.8-201ENST00000618339 1015 ntBASIC2□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.405-201ENST00000383979 100 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.451-201ENST00000384200 100 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.524-201ENST00000384564 100 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.561-201ENST00000384694 100 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 MIR518A2-201ENST00000384966 87 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 RNU6-1093P-201ENST00000391194 107 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 MTND3P23-201ENST00000431980 347 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 MTCO3P29-201ENST00000432119 779 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 RNU7-175P-201ENST00000515915 61 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 AC022616.8-201ENST00000533569 253 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 AC027288.2-201ENST00000553028 243 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 AC016727.2-201ENST00000603988 621 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
NECTIN4Q96NY8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AC006026.1-201ENST00000444025 1803 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 BX322639.1-202ENST00000423987 2213 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 RNU6-874P-201ENST00000362390 105 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.315-201ENST00000365117 102 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 RNU6-1040P-201ENST00000383974 107 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 MIR32-201ENST00000384965 70 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 MIR153-2-201ENST00000385225 87 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AC093303.1-201ENST00000514549 295 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 RNU6-58P-201ENST00000517143 103 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 DEFB131C-201ENST00000528817 165 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AL109918.3-201ENST00000603072 338 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AL355802.3-201ENST00000607571 545 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AL627230.6-201ENST00000611129 280 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms