Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.13□□□□□ -2.23
PKNOX2Q96KN3 SNRPGP20-201ENST00000604477 205 ntBASIC1.13□□□□□ -2.23
PKNOX2Q96KN3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.13□□□□□ -2.23
PKNOX2Q96KN3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 Y_RNA.409-201ENST00000383990 98 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 RNU6-784P-201ENST00000384330 106 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 RNU6-331P-201ENST00000384724 107 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MIR515-2-201ENST00000384883 83 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MIR515-1-201ENST00000384884 83 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MIR586-201ENST00000385035 97 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MIR514A2-201ENST00000385131 88 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MIR514A3-201ENST00000385132 88 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MIR549A-201ENST00000385268 96 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 USP9YP14-201ENST00000430663 563 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MTCO2P16-201ENST00000436962 677 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 HMGN2P34-201ENST00000437647 269 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MTND3P16-201ENST00000452205 344 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 MTCO1P29-201ENST00000496868 288 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 RNU6-835P-201ENST00000516974 104 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 AL512310.8-201ENST00000550183 120 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 AC121333.1-201ENST00000567488 2709 ntBASIC1.12□□□□□ -2.23
PKNOX2Q96KN3 RNU6-457P-201ENST00000363999 107 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 RNU6-534P-201ENST00000364877 106 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 RNU6-1119P-201ENST00000384349 108 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 MIR521-1-201ENST00000384902 87 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 RNU6-648P-201ENST00000410190 107 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 COX6CP10-201ENST00000416832 224 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 SNRPEP10-201ENST00000420249 274 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 AC074290.1-201ENST00000448883 135 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 MIR4421-201ENST00000578133 69 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 MIR4769-201ENST00000584126 77 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 RN7SKP299-201ENST00000606679 301 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 FAM157A-202ENST00000615155 405 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 AC137590.2-201ENST00000619709 240 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 AC068792.1-201ENST00000621354 417 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 AC009033.1-201ENST00000624279 431 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 SCARNA4-201ENST00000629045 128 ntBASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
PKNOX2Q96KN3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 SNORA33-201ENST00000363664 130 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 RNA5SP99-201ENST00000364020 114 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 SNORA4.2-201ENST00000365313 147 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 U8.10-201ENST00000384260 133 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 SNORA67.2-201ENST00000384300 149 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 RNU6-482P-201ENST00000391068 107 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC004965.1-201ENST00000413033 213 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 MTCO1P20-201ENST00000425366 358 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC009474.2-201ENST00000451383 136 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 RN7SKP210-201ENST00000459176 261 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 MTND1P35-201ENST00000526739 508 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 MIR4709-201ENST00000577272 72 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 MZT1P2-201ENST00000604387 248 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC073534.2-201ENST00000620377 381 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 AC006001.4-201ENST00000622243 395 ntBASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.1□□□□□ -2.23
PKNOX2Q96KN3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 RNU6-933P-201ENST00000384424 107 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 MIR450B-201ENST00000401182 78 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 MIR320B2-201ENST00000408479 138 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 HSPE1P13-201ENST00000451143 297 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 RNU7-57P-201ENST00000459540 60 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 RPL23AP75-201ENST00000491601 451 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AL158211.1-201ENST00000566763 763 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 MIR4742-201ENST00000581069 85 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 AC008873.1-201ENST00000625051 138 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 MIR6863-201ENST00000636112 90 ntBASIC1.09□□□□□ -2.23
PKNOX2Q96KN3 MTND5P26-201ENST00000426018 1752 ntBASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 RNU6-522P-201ENST00000364497 107 ntBASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 RNU6-1042P-201ENST00000384204 107 ntBASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 RNU6-417P-201ENST00000384712 107 ntBASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 SNORA17.3-201ENST00000391159 129 ntBASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.08□□□□□ -2.24
PKNOX2Q96KN3 RNU6-57P-201ENST00000411348 103 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms