Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-301P-201ENST00000384277 107 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 RNU1-57P-201ENST00000384491 166 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 MIR548A2-201ENST00000384956 97 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 AC084357.1-201ENST00000473404 255 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 AC097462.1-201ENST00000514125 324 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 AC022655.2-201ENST00000577280 318 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 AC087499.8-201ENST00000578406 226 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRCH3Q96II8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.46□□□□□ -1.7
LRCH3Q96II8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRCH3Q96II8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRCH3Q96II8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
LRCH3Q96II8 AC010680.1-201ENST00000590024 3590 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRCH3Q96II8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.45□□□□□ -1.7
LRCH3Q96II8 Y_RNA.298-201ENST00000364960 107 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 Y_RNA.313-201ENST00000365095 103 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 AL035423.1-201ENST00000420331 213 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 RPL30P4-201ENST00000429309 333 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 RNU7-14P-201ENST00000459331 62 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 AC106707.2-201ENST00000484182 374 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 SUMO2P16-201ENST00000519475 264 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 IGLV3-26-201ENST00000520756 302 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.45□□□□□ -1.7
LRCH3Q96II8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.45□□□□□ -1.7
LRCH3Q96II8 RNU1-30P-201ENST00000606575 163 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.45□□□□□ -1.7
LRCH3Q96II8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.45□□□□□ -1.7
LRCH3Q96II8 MAPK10-286ENST00000641208 8747 ntBASIC4.45□□□□□ -1.7
LRCH3Q96II8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRCH3Q96II8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
LRCH3Q96II8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.44□□□□□ -1.7
LRCH3Q96II8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LRCH3Q96II8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 RNU1-22P-201ENST00000363334 158 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 RNU6-979P-201ENST00000383896 107 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 RNU6-675P-201ENST00000384236 104 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 MIR147B-201ENST00000390185 80 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 RNA5SP146-201ENST00000410743 123 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 Y_RNA.666-201ENST00000516187 112 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 RNU6-162P-201ENST00000516228 103 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.44□□□□□ -1.7
LRCH3Q96II8 MIR5197-201ENST00000583721 112 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 AC021443.1-201ENST00000604478 211 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 U7.3-201ENST00000616123 62 ntBASIC4.44□□□□□ -1.7
LRCH3Q96II8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
LRCH3Q96II8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
LRCH3Q96II8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRCH3Q96II8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRCH3Q96II8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LRCH3Q96II8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRCH3Q96II8 RNU6-1104P-201ENST00000384723 104 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 RNU6-816P-201ENST00000390914 107 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 RNU6-1268P-201ENST00000391214 107 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 RNU6-1239P-201ENST00000391310 107 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 RPL21P3-201ENST00000395517 478 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 RPL23AP46-201ENST00000438548 490 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 RNU6-693P-201ENST00000516134 107 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 HIGD1AP1-201ENST00000550979 275 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 AC019288.1-201ENST00000557918 224 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.43□□□□□ -1.7
LRCH3Q96II8 MIR4666B-201ENST00000578142 81 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 MIR5588-201ENST00000581890 63 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 AC091178.1-203ENST00000584586 279 ntBASIC4.43□□□□□ -1.7
LRCH3Q96II8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.43□□□□□ -1.7
LRCH3Q96II8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.43□□□□□ -1.7
LRCH3Q96II8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LRCH3Q96II8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRCH3Q96II8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRCH3Q96II8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRCH3Q96II8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
LRCH3Q96II8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRCH3Q96II8 AL365361.1-201ENST00000566942 3481 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.42□□□□□ -1.7
LRCH3Q96II8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 RNU6-349P-201ENST00000362402 107 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 RNU6-788P-201ENST00000390967 104 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 RNU6-644P-201ENST00000391155 98 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 MIR1912-201ENST00000410389 80 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 Y_RNA.601-201ENST00000410500 113 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms