Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RNF31Q96EP0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC073325.2-201ENST00000339545 159 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 Y_RNA.101-201ENST00000363154 102 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 RNU1-57P-201ENST00000384491 166 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 Y_RNA.555-201ENST00000384673 110 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 SNORA46.1-201ENST00000391069 153 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AL033519.2-201ENST00000403958 392 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 RNU6-1199P-201ENST00000411249 104 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 RPS3P1-201ENST00000456781 192 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC112771.1-201ENST00000463581 102 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC091959.1-201ENST00000495857 238 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC145146.1-201ENST00000496370 254 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.84□□□□□ -1.95
RNF31Q96EP0 CBX3P4-201ENST00000538909 354 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC008749.1-201ENST00000597650 306 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AC093732.2-201ENST00000607950 274 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 AL365434.2-201ENST00000607979 234 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
RNF31Q96EP0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF31Q96EP0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RNF31Q96EP0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF31Q96EP0 UBE2WP1-201ENST00000362030 340 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 MIR410-201ENST00000362222 80 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 RNU6-655P-201ENST00000362858 107 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 RNU6-727P-201ENST00000363592 107 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 MIR767-201ENST00000390228 109 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 AL512633.1-201ENST00000399931 655 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 RNA5SP504-201ENST00000410676 117 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 BMS1P22-201ENST00000414726 313 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF31Q96EP0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF31Q96EP0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 RNA5SP356-201ENST00000515972 94 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 RNU6-182P-201ENST00000516970 105 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 AC079600.2-201ENST00000550076 130 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF31Q96EP0 MIR4319-201ENST00000577285 85 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 SNRPGP20-201ENST00000604477 205 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 AC004792.1-201ENST00000614523 137 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 AC091932.3-201ENST00000624223 323 ntBASIC2.83□□□□□ -1.96
RNF31Q96EP0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF31Q96EP0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RNF31Q96EP0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF31Q96EP0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 AL139281.1-201ENST00000422120 335 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 AC005042.3-201ENST00000453230 174 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.82□□□□□ -1.96
RNF31Q96EP0 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 SNORD116-28-201ENST00000516123 91 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 RPL21P9-201ENST00000556149 474 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 AC026470.2-201ENST00000561492 181 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.82□□□□□ -1.96
RNF31Q96EP0 MIR4282-201ENST00000583613 67 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 AL162424.1-201ENST00000602325 221 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.82□□□□□ -1.96
RNF31Q96EP0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF31Q96EP0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF31Q96EP0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF31Q96EP0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF31Q96EP0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF31Q96EP0 AL161431.1-201ENST00000618966 4205 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 MIR411-201ENST00000362239 96 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 SNORA25.1-201ENST00000362326 128 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 Y_RNA.83-201ENST00000363005 113 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 RNY4P28-201ENST00000365281 93 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 RNU6-1062P-201ENST00000383908 107 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 RNU2-52P-201ENST00000410680 190 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 POLR2KP2-201ENST00000438155 177 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 RPL36AP48-201ENST00000485521 314 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 MIR4672-201ENST00000583126 81 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 AC005562.2-201ENST00000618264 111 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 AC006001.4-201ENST00000622243 395 ntBASIC2.81□□□□□ -1.96
RNF31Q96EP0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF31Q96EP0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RNF31Q96EP0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RNF31Q96EP0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms