Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 Y_RNA.654-201ENST00000497848 106 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 HMGN1P12-201ENST00000499125 195 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC092436.3-201ENST00000511788 257 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 RNU6-1146P-201ENST00000516282 102 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 RNU6-1038P-201ENST00000516516 104 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC104383.1-201ENST00000530297 370 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 TPRKBP2-201ENST00000565969 475 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 MIR3664-201ENST00000579074 99 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC100830.2-201ENST00000581636 240 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 AC073648.5-201ENST00000603502 305 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 MIR8076-201ENST00000611401 83 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 SCARNA4-201ENST00000629045 128 ntBASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ECHDC3Q96DC8 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 RNU6-968P-201ENST00000384076 107 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 RNU6-325P-201ENST00000411132 105 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 PGBD4P5-201ENST00000445958 426 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 RNU6-956P-201ENST00000458868 103 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC083798.1-201ENST00000472671 131 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC091885.1-201ENST00000506658 268 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 RNU6-344P-201ENST00000516635 111 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 SNRPGP20-201ENST00000604477 205 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AC004492.1-201ENST00000607036 742 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 AL121757.2-201ENST00000611223 313 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.02□□□□□ -2.25
ECHDC3Q96DC8 MIR96-201ENST00000362288 78 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RNU6-417P-201ENST00000384712 107 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 MIR514A2-201ENST00000385131 88 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 MIR514A3-201ENST00000385132 88 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RNA5SP467-201ENST00000391274 118 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RPL21P1-201ENST00000399532 476 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 MIR450B-201ENST00000401182 78 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RNA5SP504-201ENST00000410676 117 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RNU6-1208P-201ENST00000459588 107 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RPS26P45-201ENST00000471748 340 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 RPS3AP17-201ENST00000472594 777 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 BET1P1-201ENST00000482276 359 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 Z99497.2-201ENST00000603634 310 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 AL357078.3-201ENST00000607528 618 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 FAM157A-202ENST00000615155 405 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
ECHDC3Q96DC8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
ECHDC3Q96DC8 AC121333.1-201ENST00000567488 2709 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ECHDC3Q96DC8 RNU6-1305P-201ENST00000364353 104 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 SNORD116-8-201ENST00000384365 95 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 MIR222-201ENST00000384992 110 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 Y_RNA.582-201ENST00000391023 95 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 TIMM9P3-201ENST00000428659 274 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 MTCO2P16-201ENST00000436962 677 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 HSPE1P13-201ENST00000451143 297 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 RNU6-261P-201ENST00000459506 102 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 RNU7-57P-201ENST00000459540 60 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 RNU6-221P-201ENST00000459541 99 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1□□□□□ -2.25
ECHDC3Q96DC8 RN7SKP298-201ENST00000515950 94 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 SNORA19.2-201ENST00000516013 114 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 SNORA31.10-201ENST00000516482 106 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 AC025647.1-201ENST00000517879 253 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 AL390123.1-201ENST00000603216 237 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 AC092807.2-201ENST00000609367 243 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 AC021506.2-201ENST00000612354 169 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1□□□□□ -2.25
ECHDC3Q96DC8 AC006001.4-201ENST00000622243 395 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 Z69908.1-201ENST00000622603 247 ntBASIC1□□□□□ -2.25
ECHDC3Q96DC8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 SNORD115-8-201ENST00000363856 82 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNU1-93P-201ENST00000364704 169 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 Y_RNA.296-201ENST00000364930 108 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms