Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AC008549.1-201ENST00000512900 643 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 RNA5SP481-201ENST00000516814 122 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 RNU1-117P-201ENST00000517041 158 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AC084364.2-201ENST00000546924 395 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AC126177.8-201ENST00000618339 1015 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 SCARNA15.3-201ENST00000626315 122 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 SCARNA4.1-201ENST00000628597 123 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS33AQ96AX1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 MTND4P12-201ENST00000498999 1377 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 RNU6-360P-201ENST00000390944 104 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 RNU6-57P-201ENST00000411348 103 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 AC007098.1-201ENST00000420122 367 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 RNU6-221P-201ENST00000459541 99 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 HMGN1P13-201ENST00000505795 138 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 HSBP1P1-201ENST00000555205 166 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS33AQ96AX1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.77□□□□□ -2.13
VPS33AQ96AX1 MIR424-201ENST00000362227 98 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 U3.8-201ENST00000363675 217 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 RNU6-414P-201ENST00000363705 104 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 RNU6-842P-201ENST00000384269 107 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 MIR548K-201ENST00000408406 116 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 RNU2-7P-201ENST00000410794 178 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 HMGN2P34-201ENST00000437647 269 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 RPL36AP21-201ENST00000490372 323 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 AC069439.1-201ENST00000494739 167 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 AC018462.2-201ENST00000605375 395 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 U6atac.1-201ENST00000616025 117 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.76□□□□□ -2.13
VPS33AQ96AX1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS33AQ96AX1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS33AQ96AX1 MIR449A-201ENST00000362113 91 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 RNU6-793P-201ENST00000384233 104 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.505-201ENST00000384489 102 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 RPS20P15-201ENST00000412792 311 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 HSPE1P9-201ENST00000440046 311 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 RNA5SP437-201ENST00000517249 129 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 AC011712.1-201ENST00000588959 234 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 AC011494.1-201ENST00000596454 237 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 AC100812.1-201ENST00000607622 580 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 AC006001.4-201ENST00000622243 395 ntBASIC1.75□□□□□ -2.13
VPS33AQ96AX1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS33AQ96AX1 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 MIR634-201ENST00000385208 97 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 MIR1253-201ENST00000408273 105 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 RNA5SP425-201ENST00000410336 112 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC074085.1-201ENST00000413598 418 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 RPL30P16-201ENST00000419341 429 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AP000870.1-201ENST00000472927 406 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 RPL26P26-201ENST00000480251 434 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 RPS29P11-201ENST00000496507 171 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC018710.1-201ENST00000506509 158 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC026782.1-201ENST00000512952 449 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC046134.1-201ENST00000514454 666 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC093303.1-201ENST00000514549 295 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC025647.1-201ENST00000517879 253 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC024995.1-201ENST00000523014 93 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC092794.1-201ENST00000612734 582 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AC064859.1-201ENST00000624741 174 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 AL133216.2-202ENST00000634512 349 ntBASIC1.74□□□□□ -2.13
VPS33AQ96AX1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS33AQ96AX1 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 MIR10B-201ENST00000385011 110 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 RNU1-139P-201ENST00000391307 165 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 AC016909.1-201ENST00000415916 166 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms