Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SNORA48.2-201ENST00000390926 124 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 RNU11-5P-201ENST00000391216 129 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 MIR1302-5-201ENST00000408164 150 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 AL139247.1-201ENST00000422768 325 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 Z74021.1-201ENST00000423610 407 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 AC016717.1-201ENST00000448918 286 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 AL049873.1-201ENST00000480540 376 ntBASIC4.23□□□□□ -1.73
HLA-CQ95604 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-CQ95604 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-CQ95604 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-CQ95604 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-CQ95604 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-CQ95604 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-CQ95604 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-CQ95604 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-CQ95604 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-CQ95604 AC058791.1-201ENST00000608412 3198 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 RNU6-486P-201ENST00000363116 107 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 Y_RNA.163-201ENST00000363702 113 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 Y_RNA.328-201ENST00000365208 113 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 RNU6-1113P-201ENST00000384348 107 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 SNORD12C-201ENST00000386307 89 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 Z98742.2-201ENST00000431564 187 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 IGKV1-22-201ENST00000524313 326 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-CQ95604 AC025627.2-201ENST00000576220 160 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-CQ95604 MIR4765-201ENST00000585007 77 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 AC006111.3-201ENST00000622137 383 ntBASIC4.22□□□□□ -1.73
HLA-CQ95604 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-CQ95604 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
HLA-CQ95604 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-CQ95604 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-CQ95604 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-CQ95604 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-CQ95604 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
HLA-CQ95604 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-CQ95604 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-CQ95604 Y_RNA.49-201ENST00000362714 112 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 U8.6-201ENST00000364939 135 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 SNORD24-201ENST00000383884 75 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 MIR520G-201ENST00000385064 90 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 MIR1263-201ENST00000408324 86 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 AC016909.1-201ENST00000415916 166 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 RPL36AP10-201ENST00000421785 322 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-CQ95604 SNRPGP5-201ENST00000456003 220 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 AP001486.1-201ENST00000463339 476 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 RPL29P14-201ENST00000495837 428 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 RAC1P2-201ENST00000511164 579 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 RNA5SP446-201ENST00000515955 82 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 RN7SKP18-201ENST00000516005 275 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 RNU7-172P-201ENST00000517125 64 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 MIR4438-201ENST00000585271 93 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 AP001318.4-201ENST00000616637 121 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 AC002064.3-201ENST00000623448 346 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-CQ95604 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-CQ95604 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-CQ95604 AC087190.4-201ENST00000574616 8334 ntBASIC4.21□□□□□ -1.74
HLA-CQ95604 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-CQ95604 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-CQ95604 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-CQ95604 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-CQ95604 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-CQ95604 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-CQ95604 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-CQ95604 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-CQ95604 RNU6-640P-201ENST00000363693 105 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 SNORD73B-201ENST00000364394 72 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 RNA5SP151-201ENST00000365632 117 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 RNU6-756P-201ENST00000383997 107 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 RNU6-1083P-201ENST00000384022 107 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 Y_RNA.558-201ENST00000384685 113 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 SNORD66.1-201ENST00000391230 76 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-CQ95604 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-CQ95604 MIR449C-201ENST00000516047 92 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 RNA5SP179-201ENST00000517284 121 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-CQ95604 RNU6-94P-201ENST00000607728 107 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 AC107294.3-201ENST00000609211 526 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 MIR6852-201ENST00000621699 66 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-CQ95604 AL136360.1-201ENST00000503377 1900 ntBASIC4.2□□□□□ -1.74
HLA-CQ95604 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
HLA-CQ95604 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-CQ95604 AC139713.2-215ENST00000641428 5037 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-CQ95604 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-CQ95604 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-CQ95604 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-CQ95604 MIR767-201ENST00000390228 109 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 MIR921-201ENST00000401133 56 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 SNORA71B-202ENST00000439232 272 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 AL133162.1-201ENST00000463228 453 ntBASIC4.19□□□□□ -1.74
HLA-CQ95604 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-CQ95604 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms