Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC021739.1-201ENST00000559631 174 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC004832.5-201ENST00000608677 401 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 AC005562.2-201ENST00000618264 111 ntBASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHKBP1Q8TBC3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 Y_RNA.116-201ENST00000363292 103 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 SNORA38.1-201ENST00000364172 131 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RNA5SP42-201ENST00000364278 115 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 SNORA48.2-201ENST00000390926 124 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RNY4P30-201ENST00000410216 95 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 MLLT10P1-201ENST00000418346 262 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 AC027124.2-201ENST00000428249 105 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RPS4XP2-201ENST00000458402 793 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RN7SL594P-201ENST00000470590 287 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 AC117454.1-201ENST00000491120 168 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 Y_RNA.677-201ENST00000516401 85 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RNU7-115P-201ENST00000516433 55 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 AL034555.1-201ENST00000604816 211 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RNVU1-4-201ENST00000612985 164 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 MIR548AY-201ENST00000617669 107 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 MIR8057-201ENST00000620957 69 ntBASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SHKBP1Q8TBC3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AL133412.1-201ENST00000380194 2992 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AL356274.2-201ENST00000624379 3752 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 RN7SKP111-201ENST00000410349 271 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 SNORA36B-201ENST00000410438 131 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 Y_RNA.617-201ENST00000410920 90 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AL159169.1-201ENST00000421119 127 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AL031737.1-201ENST00000450125 223 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AC084357.1-201ENST00000473404 255 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 RPS29P2-201ENST00000479278 136 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 SNORA70.12-201ENST00000516084 153 ntBASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
SHKBP1Q8TBC3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-978P-201ENST00000364371 103 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 SNORA67.2-201ENST00000384300 149 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-880P-201ENST00000384526 107 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 MIR128-1-201ENST00000384921 82 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 HSPE1P21-201ENST00000438283 308 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 SNORA70.14-201ENST00000516205 110 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 RNU6-537P-201ENST00000517277 103 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AC027176.1-201ENST00000560204 514 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AC025281.1-201ENST00000567026 265 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 MIR5006-201ENST00000583027 110 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AC012493.2-201ENST00000595083 291 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 AL121890.5-201ENST00000620848 304 ntBASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHKBP1Q8TBC3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 SNORD73B-201ENST00000364394 72 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 SNORA79-201ENST00000408376 140 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 RNA5SP239-201ENST00000410218 129 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 AL365496.1-201ENST00000426885 215 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 Z75741.1-201ENST00000446793 314 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 HMGN2P21-201ENST00000447764 270 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.58□□□□□ -1.84
SHKBP1Q8TBC3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms