Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL022154.1-201ENST00000604698 785 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORA32.1-201ENST00000364514 115 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU4-48P-201ENST00000365559 182 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORD116-20-201ENST00000384529 92 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1242P-201ENST00000391052 103 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MRPL42P3-201ENST00000401492 326 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL451046.2-201ENST00000403074 277 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC073415.1-201ENST00000449240 153 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC109479.2-201ENST00000517842 174 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC131055.1-201ENST00000584626 316 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU4-15P-201ENST00000362613 141 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.55-201ENST00000362797 102 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORA2.2-201ENST00000365473 135 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1200P-201ENST00000384162 107 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.551-201ENST00000384661 102 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MIR320B2-201ENST00000408479 138 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL669831.1-202ENST00000428504 417 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 PCNPP5-201ENST00000452246 481 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC104073.3-201ENST00000610942 955 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORD56.1-201ENST00000362913 68 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RNU5F-3P-201ENST00000363767 117 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MIR587-201ENST00000384845 96 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.598-201ENST00000410480 95 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MTCO3P18-201ENST00000440206 761 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC016717.1-201ENST00000448918 286 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC130509.1-201ENST00000464158 433 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 PDCD5P2-201ENST00000507570 312 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC141557.1-201ENST00000540982 400 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MIR4438-201ENST00000585271 93 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC018714.1-201ENST00000605028 208 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RNU6-862P-201ENST00000362804 105 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.363-201ENST00000365529 113 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MIR1283-2-201ENST00000408621 87 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RNA5SP201-201ENST00000410316 124 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RNA5SP451-201ENST00000410588 110 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AL031779.1-201ENST00000415663 330 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AL356583.2-201ENST00000426536 280 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RPL22P17-201ENST00000438729 315 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MTND1P12-201ENST00000455231 147 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 USP9YP25-201ENST00000457708 443 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AL360219.1-201ENST00000610230 366 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 CASC19-280ENST00000642102 1351 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RNU4-76P-201ENST00000364509 141 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.552-201ENST00000384665 112 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MIR549A-201ENST00000385268 96 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 RNA5SP109-201ENST00000391010 116 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 FABP5P4-201ENST00000437203 171 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 MTND5P2-201ENST00000442927 1142 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC074344.1-201ENST00000512823 224 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.09□□□□□ -2.39
SYNE1Q8NF91 PIGPP4-201ENST00000584447 307 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AC006566.1-201ENST00000608943 513 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 AL136317.1-201ENST00000612653 226 ntBASIC0.09□□□□□ -2.39
SYNE1Q8NF91 SNORA20.2-201ENST00000383922 131 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.480-201ENST00000384364 102 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-903P-201ENST00000391270 109 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU2-61P-201ENST00000411069 191 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 USP9YP28-201ENST00000435142 589 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNA5SP54-201ENST00000516951 92 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AP003392.2-201ENST00000527269 208 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC091135.1-201ENST00000585943 307 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 SNRPGP20-201ENST00000604477 205 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC007363.1-201ENST00000604736 620 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC092354.1-201ENST00000606057 376 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AL138960.2-201ENST00000625145 535 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-369P-201ENST00000362515 102 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.536-201ENST00000384621 113 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 SNORA12.1-201ENST00000390873 148 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-607P-201ENST00000411283 108 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 MTCO3P29-201ENST00000432119 779 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC243964.1-201ENST00000441814 261 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC245047.8-201ENST00000456455 284 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC008628.2-201ENST00000502605 298 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 MTND1P22-201ENST00000510572 951 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.09□□□□□ -2.4
SYNE1Q8NF91 EIF1P4-201ENST00000572664 335 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 AC108747.1-201ENST00000609508 535 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 U6.108-201ENST00000637764 58 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.52-201ENST00000362760 96 ntBASIC0.09□□□□□ -2.4
SYNE1Q8NF91 RNU6-1099P-201ENST00000363533 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms