Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MIR153-2-201ENST00000385225 87 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RN7SKP210-201ENST00000459176 261 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 UBL5P3-201ENST00000475112 231 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AC097473.1-201ENST00000508142 408 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AL117351.2-201ENST00000513571 157 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.691-201ENST00000516611 103 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RNA5SP384-201ENST00000516615 116 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-1213P-201ENST00000517075 94 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-58P-201ENST00000517143 103 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AL121579.1-201ENST00000555129 305 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 MIR3198-2-201ENST00000577868 80 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 RMST_6.1-201ENST00000611980 203 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 U1.36-201ENST00000620684 176 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 AC022513.1-201ENST00000624512 117 ntBASIC1.45□□□□□ -2.18
CCDC71LQ8N9Z2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 SNORD115-32-201ENST00000364079 82 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.303-201ENST00000364998 94 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-418P-201ENST00000384035 107 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 SNORA48.1-201ENST00000390879 135 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 SNORA75.4-201ENST00000391278 119 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 RNU2-2P-201ENST00000410396 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC004866.1-201ENST00000411748 78 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 DPH3P2-201ENST00000422618 250 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AL353997.1-201ENST00000432936 108 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 RPL23AP50-201ENST00000434149 455 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.635-201ENST00000459041 101 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 SNORA25.14-201ENST00000516481 132 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 RNU1-117P-201ENST00000517041 158 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC087441.2-201ENST00000529141 262 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 MIR5094-201ENST00000578766 85 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC104984.5-201ENST00000586878 94 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 AL355802.3-201ENST00000607571 545 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.15-201ENST00000611544 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.16-201ENST00000613119 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.12-201ENST00000613778 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.20-201ENST00000613956 192 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.9-201ENST00000615427 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.11-201ENST00000616345 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.2-201ENST00000616535 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.3-201ENST00000617785 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.19-201ENST00000618602 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 RNU2-1-201ENST00000618664 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.6-201ENST00000619225 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.5-201ENST00000619465 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 U2.10-201ENST00000620268 191 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 MTND4P12-201ENST00000498999 1377 ntBASIC1.44□□□□□ -2.18
CCDC71LQ8N9Z2 BX322639.1-202ENST00000423987 2213 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 U8.2-201ENST00000363156 134 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.142-201ENST00000363491 102 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-439P-201ENST00000384188 106 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-17P-201ENST00000384245 107 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-18P-201ENST00000384527 107 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-370P-201ENST00000411008 104 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 USMG5P1-201ENST00000425964 177 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AL121890.1-201ENST00000435457 205 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC007395.1-201ENST00000451333 677 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC016925.1-201ENST00000458303 298 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 SCARNA16.2-201ENST00000516520 172 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-1198P-201ENST00000516904 67 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RNA5SP54-201ENST00000516951 92 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC105029.1-201ENST00000520250 669 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 RRN3P3-201ENST00000549207 578 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC027288.2-201ENST00000553028 243 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 UBL5P4-201ENST00000562584 236 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC104581.2-201ENST00000572227 430 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 MIR4753-201ENST00000585119 83 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 UBE2V2P2-201ENST00000587677 504 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC103810.8-201ENST00000607347 118 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC005014.2-201ENST00000607795 599 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AC083806.3-201ENST00000614016 455 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 AL159152.1-201ENST00000635019 2587 ntBASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC71LQ8N9Z2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNY1P16-201ENST00000363063 111 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-873P-201ENST00000363833 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms