Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 AL359075.3-201ENST00000613288 217 ntBASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 snoZ196.1-201ENST00000625269 89 ntBASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 U6.108-201ENST00000637764 58 ntBASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAM1L1Q8N609 Y_RNA.191-201ENST00000363972 113 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RNU6-1305P-201ENST00000364353 104 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RNU6-996P-201ENST00000365438 107 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MIR320B2-201ENST00000408479 138 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RN7SKP200-201ENST00000410564 320 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MTCYBP8-201ENST00000422855 651 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AL606517.2-201ENST00000442855 241 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MTND1P27-201ENST00000451117 902 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MTCO2P18-201ENST00000457151 658 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RNU7-57P-201ENST00000459540 60 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MTCO3P38-201ENST00000468910 766 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 SNORA31.4-201ENST00000516049 129 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 SNORA31.10-201ENST00000516482 106 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RNU6-344P-201ENST00000516635 111 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 RNU1-142P-201ENST00000516682 145 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 SNORA70.22-201ENST00000517160 124 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AC087854.1-201ENST00000519706 414 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MTND1P24-201ENST00000552175 861 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AC022217.4-201ENST00000604389 163 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AL603755.1-201ENST00000619504 163 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 AL078596.1-201ENST00000624856 447 ntBASIC0.84□□□□□ -2.27
TRAM1L1Q8N609 SNORD12-201ENST00000391002 90 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 RNU6-221P-201ENST00000459541 99 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AF186996.7-201ENST00000492781 209 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 RNU6-189P-201ENST00000516120 101 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 RNU6-415P-201ENST00000516252 97 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AC025647.1-201ENST00000517879 253 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 MIR3908-201ENST00000579798 126 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AL513534.2-201ENST00000603836 250 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AC064836.2-201ENST00000609491 462 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AC103705.1-201ENST00000619013 241 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AC137590.2-201ENST00000619709 240 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 AL513423.1-201ENST00000621695 132 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 SCARNA4-201ENST00000629045 128 ntBASIC0.83□□□□□ -2.28
TRAM1L1Q8N609 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 RNU6-82P-201ENST00000363970 107 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 Y_RNA.238-201ENST00000364441 102 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 RNU6-1329P-201ENST00000365664 107 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 RNU5A-6P-201ENST00000384136 116 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AL049545.1-201ENST00000401856 572 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 RNU6-1054P-201ENST00000411293 104 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 TIMM9P3-201ENST00000428659 274 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AL358934.1-201ENST00000432346 324 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AL031667.1-201ENST00000440222 725 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AC092991.1-201ENST00000477176 376 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AC004584.2-201ENST00000570407 410 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 MIR5695-201ENST00000579717 85 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AC004223.2-201ENST00000590309 544 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AL021879.1-201ENST00000611756 288 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 MIR8054-201ENST00000620877 86 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 AC068792.1-201ENST00000621354 417 ntBASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 FER-210ENST00000628534 558 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAM1L1Q8N609 Y_RNA.123-201ENST00000363338 102 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 RNU6-1317P-201ENST00000364582 104 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 RNU6-1240P-201ENST00000365155 104 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 RNU6-505P-201ENST00000384427 107 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 AL606923.1-201ENST00000406616 190 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 AC010154.1-201ENST00000425857 269 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 AL445567.1-201ENST00000439121 144 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 FAM106DP-201ENST00000586416 501 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 AC087683.1-201ENST00000591187 441 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 AC097065.2-201ENST00000608159 533 ntBASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
TRAM1L1Q8N609 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAM1L1Q8N609 RNU6-1103P-201ENST00000384150 107 ntBASIC0.8□□□□□ -2.28
TRAM1L1Q8N609 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAM1L1Q8N609 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAM1L1Q8N609 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms