Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-308P-201ENST00000390957 107 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RN7SKP223-201ENST00000410582 62 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RN7SKP192-201ENST00000411291 327 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 MTCO3P19-201ENST00000415864 321 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 MCFD2P1-201ENST00000417812 300 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AL356320.1-201ENST00000429616 163 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 MTCYBP6-201ENST00000441810 138 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 HMGN2P18-201ENST00000450680 270 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 U8.22-201ENST00000459141 133 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.15□□□□□ -2.07
BEST3Q8N1M1 SNORA25.10-201ENST00000515926 124 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNU4-77P-201ENST00000516692 156 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNA5SP490-201ENST00000517141 136 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AC093023.1-201ENST00000547375 507 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AC020661.2-201ENST00000560114 134 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 MIR3171-201ENST00000584270 74 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AC067747.1-201ENST00000608026 250 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AC083806.3-201ENST00000614016 455 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 AL606534.2-204ENST00000635008 178 ntBASIC2.15□□□□□ -2.07
BEST3Q8N1M1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.15□□□□□ -2.07
BEST3Q8N1M1 RNU6-879P-201ENST00000364328 108 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 SNORD31B-201ENST00000364977 69 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 RNU6-438P-201ENST00000365561 103 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 RNU1-148P-201ENST00000384472 162 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 MIR300-201ENST00000401138 83 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 SRIP3-201ENST00000413200 219 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AC096644.2-201ENST00000429278 159 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AL121890.1-201ENST00000435457 205 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 MTND4P19-201ENST00000446659 478 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AL163540.1-201ENST00000485382 386 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 RPS29P21-201ENST00000496272 170 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 SNORA4.4-201ENST00000515921 135 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 RNU6-475P-201ENST00000516073 104 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.711-201ENST00000516993 102 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 CYCSP23-201ENST00000519781 313 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 GNAI2P1-201ENST00000541815 315 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AC006600.1-201ENST00000572529 153 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AC125232.2-201ENST00000592457 143 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AL356055.1-201ENST00000602528 446 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
BEST3Q8N1M1 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
BEST3Q8N1M1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.202-201ENST00000364083 110 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC004866.1-201ENST00000411748 78 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 RPS15AP28-201ENST00000435088 386 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 CHEK2P4-201ENST00000450340 246 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 YWHAEP4-201ENST00000505390 198 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 ATP5EP1-201ENST00000510257 156 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 Y_RNA.683-201ENST00000516508 93 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 SNORA40.14-201ENST00000516543 86 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 RRN3P3-201ENST00000549207 578 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AL442163.3-201ENST00000554110 156 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AL442663.2-201ENST00000554385 511 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 MIR3126-201ENST00000577443 74 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC026271.5-201ENST00000577873 130 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 MIR3124-201ENST00000582636 67 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC007485.1-201ENST00000616755 206 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 MIR6873-201ENST00000622788 63 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
BEST3Q8N1M1 AC007336.1-201ENST00000576365 3828 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 MTND5P6-201ENST00000422338 1798 ntBASIC2.13□□□□□ -2.07
BEST3Q8N1M1 MTND5P35-201ENST00000557537 1720 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 RNU6-1301P-201ENST00000362724 104 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 SNORA22B-201ENST00000383876 138 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 MIR329-1-201ENST00000385028 80 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AL033519.2-201ENST00000403958 392 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 RNU6-1001P-201ENST00000411265 100 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 EDDM3CP-201ENST00000415977 425 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 DPH3P2-201ENST00000422618 250 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AL160004.2-201ENST00000432935 350 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC010095.1-201ENST00000443543 144 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC007395.1-201ENST00000451333 677 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC091179.3-201ENST00000474761 144 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC093259.1-201ENST00000509755 300 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC107222.1-201ENST00000510899 637 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 RNU6-991P-201ENST00000516168 107 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 RN7SKP49-201ENST00000516675 260 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 RNA5SP82-201ENST00000516707 92 ntBASIC2.12□□□□□ -2.07
BEST3Q8N1M1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms