Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNORD31B-201ENST00000364977 69 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.395-201ENST00000383945 109 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 SNORA11.4-201ENST00000408823 129 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AC005534.2-201ENST00000431047 433 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AC009237.7-201ENST00000447357 229 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.43□□□□□ -2.02
HERC6Q8IVU3 MIR2053-201ENST00000459295 91 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 RNU6-1170P-201ENST00000515974 106 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 RNU6-295P-201ENST00000516901 104 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AL355802.3-201ENST00000607571 545 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AC007742.2-201ENST00000618226 398 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 AC090971.5-201ENST00000621102 293 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 uc_338.22-201ENST00000622722 187 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 MTND5P10-201ENST00000603719 1809 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.216-201ENST00000364205 93 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 SNORD14D-201ENST00000384390 87 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 MIR559-201ENST00000385188 96 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 U8.13-201ENST00000390842 128 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 RNU6-159P-201ENST00000391080 106 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC092423.1-201ENST00000430165 186 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 USP9YP16-201ENST00000430287 407 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 USP9YP23-201ENST00000455085 407 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC114982.1-201ENST00000469402 321 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 RNU6-470P-201ENST00000515954 104 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 SNORA25.14-201ENST00000516481 132 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC004584.2-201ENST00000570407 410 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 MIR4753-201ENST00000585119 83 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.42□□□□□ -2.02
HERC6Q8IVU3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HERC6Q8IVU3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.128-201ENST00000363391 112 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.364-201ENST00000365532 101 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 MIR625-201ENST00000385047 85 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 SNORA26.9-201ENST00000391322 122 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AC123900.1-201ENST00000420390 96 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 MTCO3P29-201ENST00000432119 779 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AL137792.2-201ENST00000443484 235 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 MTCO3P8-201ENST00000453691 755 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 RNU7-87P-201ENST00000459343 62 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AC022493.2-201ENST00000506122 481 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AC027288.2-201ENST00000553028 243 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 SUB1P3-201ENST00000564581 315 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 MIR4529-201ENST00000578110 78 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AP000942.3-201ENST00000603702 160 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AC130454.1-201ENST00000622948 401 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 AC134503.1-201ENST00000633048 54 ntBASIC2.41□□□□□ -2.02
HERC6Q8IVU3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HERC6Q8IVU3 RNU6-1115P-201ENST00000362490 106 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNU1-62P-201ENST00000362599 164 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNU6-1040P-201ENST00000383974 107 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNU6-308P-201ENST00000390957 107 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MIR1302-11-201ENST00000408051 138 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MIR1302-9-201ENST00000408365 138 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MIR1302-10-201ENST00000408734 138 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
HERC6Q8IVU3 PMCHL1-202ENST00000423102 261 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 AC007395.1-201ENST00000451333 677 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNU6-344P-201ENST00000516635 111 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 RNU7-4P-201ENST00000516961 62 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.4□□□□□ -2.03
HERC6Q8IVU3 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 AC009127.3-201ENST00000570531 403 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 AC090617.3-201ENST00000573670 475 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MIR3171-201ENST00000584270 74 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 CYP2C61P-201ENST00000604072 290 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MIR1302-2-201ENST00000607096 138 ntBASIC2.4□□□□□ -2.03
HERC6Q8IVU3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.4□□□□□ -2.03
HERC6Q8IVU3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
HERC6Q8IVU3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms