| HOOK3 | Q86VS8 | CST2P1-201 | ENST00000425770 | 87 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | NAALADL2-AS1-201 | ENST00000426315 | 804 nt | TSL 5 BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | Z82188.1-201 | ENST00000436709 | 154 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AL138921.2-201 | ENST00000443919 | 578 nt | TSL 5 BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | snoU13.30-201 | ENST00000458951 | 104 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | HMGN1P13-201 | ENST00000505795 | 138 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | TRAPPC2P7-201 | ENST00000509650 | 231 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | SNHG14-219 | ENST00000553134 | 470 nt | TSL 2 BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC090517.2-201 | ENST00000614966 | 680 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC126177.8-201 | ENST00000618339 | 1015 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MIR338-201 | ENST00000636369 | 67 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MIR3662-201 | ENST00000637030 | 95 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | LINC01790-201 | ENST00000447194 | 2852 nt | TSL 2 BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | PTPN22-206 | ENST00000525799 | 2118 nt | TSL 1 (best) BASIC | 1.69 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-414P-201 | ENST00000363705 | 104 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-1013P-201 | ENST00000384180 | 107 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | Y_RNA.453-201 | ENST00000384223 | 109 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MIR153-2-201 | ENST00000385225 | 87 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-1148P-201 | ENST00000410992 | 104 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AL024497.2-201 | ENST00000457081 | 317 nt | TSL 3 BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-970P-201 | ENST00000516312 | 107 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-58P-201 | ENST00000517143 | 103 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC084816.1-207 | ENST00000538317 | 584 nt | TSL 4 BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC084364.2-201 | ENST00000546924 | 395 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC002558.3-201 | ENST00000574021 | 401 nt | TSL 3 BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC022035.1-201 | ENST00000579923 | 302 nt | TSL 2 BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AP003465.2-201 | ENST00000602571 | 373 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | uc_338.5-201 | ENST00000611839 | 155 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AL078596.1-201 | ENST00000624856 | 447 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | SKIL-204 | ENST00000458537 | 7182 nt | APPRIS P1 TSL 1 (best) BASIC | 1.68 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-137P-201 | ENST00000363680 | 108 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | Y_RNA.319-201 | ENST00000365138 | 92 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-831P-201 | ENST00000384548 | 107 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MIR764-201 | ENST00000390811 | 85 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-360P-201 | ENST00000390944 | 104 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | SNORD115-47-201 | ENST00000391226 | 86 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AL355314.2-201 | ENST00000427182 | 436 nt | TSL 3 BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MTCO3P29-201 | ENST00000432119 | 779 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | HSPE1P9-201 | ENST00000440046 | 311 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | LINC01710-201 | ENST00000446002 | 390 nt | TSL 5 BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | Y_RNA.655-201 | ENST00000515919 | 96 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNA5SP437-201 | ENST00000517249 | 129 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC023200.1-201 | ENST00000519660 | 651 nt | TSL 3 BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MIR5696-201 | ENST00000578474 | 85 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | SNORD11B-201 | ENST00000607707 | 90 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | NCBP1-205 | ENST00000629069 | 249 nt | TSL 5 BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | BCL2L11-225 | ENST00000640419 | 249 nt | APPRIS ALT2 TSL 5 BASIC | 1.67 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | ABCA5-201 | ENST00000392676 | 8220 nt | APPRIS P1 TSL 1 (best) BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | snoU2-30.2-201 | ENST00000362805 | 70 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-596P-201 | ENST00000365395 | 98 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AL627390.1-201 | ENST00000396055 | 340 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC007098.1-201 | ENST00000420122 | 367 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MTATP6P13-201 | ENST00000438531 | 667 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | MTND4LP16-201 | ENST00000440828 | 295 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RPL26P26-201 | ENST00000480251 | 434 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC023790.1-201 | ENST00000482174 | 347 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RPL36AP21-201 | ENST00000490372 | 323 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC091976.1-202 | ENST00000509211 | 630 nt | TSL 3 BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNA5SP481-201 | ENST00000516814 | 122 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-273P-201 | ENST00000516937 | 96 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6-250P-201 | ENST00000516958 | 103 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | LINC02055-204 | ENST00000521034 | 432 nt | TSL 5 BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC027288.2-201 | ENST00000553028 | 243 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC026462.3-202 | ENST00000564361 | 515 nt | TSL 3 BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | AC100781.1-201 | ENST00000597142 | 383 nt | TSL 3 BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNU6ATAC35P-201 | ENST00000609276 | 444 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.65 | □□□□□ -2.14 | | |
| HOOK3 | Q86VS8 | RNA5SP190-201 | ENST00000365222 | 118 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RNU6-306P-201 | ENST00000384617 | 107 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RNU6-482P-201 | ENST00000391068 | 107 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RN7SKP51-201 | ENST00000410781 | 304 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | AL590399.1-203 | ENST00000412631 | 256 nt | TSL 5 BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | AL592431.2-201 | ENST00000422198 | 171 nt | TSL 3 BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | FTH1P12-201 | ENST00000432137 | 551 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | snoU13.9-201 | ENST00000458927 | 103 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RNU6-1088P-201 | ENST00000516850 | 104 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | AP001496.1-201 | ENST00000579113 | 471 nt | TSL 4 BASIC | 1.65 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | EMCN-202 | ENST00000305864 | 1575 nt | TSL 1 (best) BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | LINC00645-203 | ENST00000557399 | 3512 nt | TSL 1 (best) BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RNU1-62P-201 | ENST00000362599 | 164 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | SNORA72.2-201 | ENST00000365028 | 127 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RNU6-17P-201 | ENST00000384245 | 107 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | RNU6-18P-201 | ENST00000384527 | 107 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| HOOK3 | Q86VS8 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 1.64 | □□□□□ -2.15 | | |