Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RNU6-597P-201ENST00000365620 102 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 SNORA20B-201ENST00000384220 132 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 SNORD20-201ENST00000384550 80 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 Y_RNA.542-201ENST00000384641 111 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AL355796.1-201ENST00000406706 323 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 Z82209.1-201ENST00000422141 2135 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 U3.44-201ENST00000458938 192 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 RNU7-57P-201ENST00000459540 60 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AC083906.5-201ENST00000503722 328 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 RN7SKP179-201ENST00000516126 217 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 RNU6-919P-201ENST00000516731 104 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 U7.2-201ENST00000607576 63 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AC012531.5-201ENST00000611375 151 ntBASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE3DQ7Z6J8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 CENPCP1-201ENST00000533085 2578 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AL161912.2-201ENST00000565707 3007 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 Y_RNA.124-201ENST00000363339 93 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 RNU6-674P-201ENST00000363831 107 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 RNU6-975P-201ENST00000384296 105 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 Y_RNA.521-201ENST00000384560 114 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 Y_RNA.563-201ENST00000384707 108 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 MIR554-201ENST00000384874 96 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 MT-TT-201ENST00000387460 66 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 SNORA79-201ENST00000408376 140 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 RNU2-55P-201ENST00000411146 174 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 Z98742.2-201ENST00000431564 187 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 SNORD105B-201ENST00000458770 79 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 RNU6-1211P-201ENST00000459179 105 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 RNU7-14P-201ENST00000459331 62 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 RN7SL594P-201ENST00000470590 287 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC117454.1-201ENST00000491120 168 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC018630.3-201ENST00000542637 96 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AL020997.2-201ENST00000602607 184 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC005972.2-201ENST00000604690 348 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC093732.2-201ENST00000607950 274 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 AL021368.2-201ENST00000606125 5352 ntBASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
UBE3DQ7Z6J8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RNU6-768P-201ENST00000384683 107 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RNA5SP354-201ENST00000391247 136 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AL512604.1-201ENST00000404812 257 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RN7SKP101-201ENST00000411376 320 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AC092017.2-201ENST00000427600 362 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AC092991.1-201ENST00000477176 376 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RNU4-57P-201ENST00000515980 135 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RNU2-34P-201ENST00000516534 121 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AP001328.1-201ENST00000528550 176 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AL160236.1-201ENST00000556317 195 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 AC022149.2-201ENST00000621061 203 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3DQ7Z6J8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.34□□□□□ -1.88
UBE3DQ7Z6J8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
UBE3DQ7Z6J8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBE3DQ7Z6J8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 SNORD31B-201ENST00000364977 69 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 RNU6-234P-201ENST00000365229 104 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 SNORD6-201ENST00000365444 73 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 AL359837.1-201ENST00000381357 287 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 RNU6-437P-201ENST00000459408 95 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 AC026403.1-201ENST00000518938 295 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 MIR3922-201ENST00000585192 84 ntBASIC3.33□□□□□ -1.88
UBE3DQ7Z6J8 POLR3GP1-201ENST00000594073 261 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms