Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC019205.3-201ENST00000424573 156 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 AC027124.2-201ENST00000428249 105 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 AC016700.2-201ENST00000446011 156 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 PMCHL2-203ENST00000457791 237 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 AC015911.1-201ENST00000495111 156 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 AC108729.3-201ENST00000513484 108 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 RNU6-470P-201ENST00000515954 104 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 RNU6-307P-201ENST00000516743 106 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 CBX3P4-201ENST00000538909 354 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 MIR4790-201ENST00000577799 79 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 MIR1248-201ENST00000629190 106 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 AC112487.2-201ENST00000637950 304 ntBASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RAI1Q7Z5J4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 SNORD115-32-201ENST00000364079 82 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 RNA5SP493-201ENST00000364115 91 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 MIR32-201ENST00000384965 70 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC019129.1-201ENST00000403786 261 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 MIR320B2-201ENST00000408479 138 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 RPS26P42-201ENST00000413485 326 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AL357134.1-201ENST00000445848 426 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 RPL7P42-201ENST00000481005 679 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC018710.1-201ENST00000506509 158 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 RNU6-344P-201ENST00000516635 111 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 MIR514B-201ENST00000516774 80 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC022616.4-201ENST00000522985 181 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 CBX3P8-201ENST00000532412 525 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC060780.3-201ENST00000589464 80 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AL359314.1-201ENST00000616913 261 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC098657.3-201ENST00000620434 263 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 AC104985.2-201ENST00000620598 500 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.53□□□□□ -2.16
RAI1Q7Z5J4 RNU4-79P-201ENST00000362764 141 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU1-52P-201ENST00000384190 164 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-281P-201ENST00000384212 103 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-331P-201ENST00000384724 107 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-700P-201ENST00000391043 107 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AL512604.1-201ENST00000404812 257 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AC091874.1-201ENST00000511402 339 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-507P-201ENST00000516045 100 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-1016P-201ENST00000516689 94 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-545P-201ENST00000362681 104 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 Y_RNA.72-201ENST00000362894 103 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 SNORA67.2-201ENST00000384300 149 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNU6-360P-201ENST00000390944 104 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 MIR548K-201ENST00000408406 116 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 MIR548F5-201ENST00000408421 86 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AL121594.1-201ENST00000475906 575 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 RNA5SP364-201ENST00000516938 78 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 AC090617.3-201ENST00000573670 475 ntBASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RAI1Q7Z5J4 MTND5P10-201ENST00000603719 1809 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 AC080100.1-201ENST00000624239 5356 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 RNU6-95P-201ENST00000384697 107 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 Y_RNA.594-201ENST00000410373 140 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 RNU2-40P-201ENST00000410833 196 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 RNU6-1304P-201ENST00000411374 106 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 RPS27P21-201ENST00000486977 252 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 RNU6-559P-201ENST00000516151 98 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 ANP32BP3-201ENST00000559213 706 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 AC016727.2-201ENST00000603988 621 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
RAI1Q7Z5J4 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
RAI1Q7Z5J4 SNORD50.1-201ENST00000362987 71 ntBASIC1.5□□□□□ -2.17
RAI1Q7Z5J4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms