Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CALM2P4-201ENST00000430810 426 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 AF228730.3-201ENST00000436691 102 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 AC023449.1-201ENST00000454464 154 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 AC010531.2-201ENST00000465012 153 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 SNORA40.13-201ENST00000516379 120 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 RNU6-638P-201ENST00000516582 104 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 SNORA67.7-201ENST00000516664 135 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 MIR3158-1-201ENST00000583596 81 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 HSPE1P7-201ENST00000604681 321 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 Y_RNA.203-201ENST00000364106 102 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 MIR570-201ENST00000384917 97 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 MIR1283-1-201ENST00000408494 87 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC245291.1-201ENST00000419501 328 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC002075.2-201ENST00000425207 252 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 SNORD11-201ENST00000459124 84 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC112771.1-201ENST00000463581 102 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AP000873.1-201ENST00000463987 400 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 RN7SL542P-201ENST00000467147 294 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AL365205.2-201ENST00000594586 68 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC062037.1-201ENST00000605302 128 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 RNU1-30P-201ENST00000606575 163 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 AC010889.1-201ENST00000566193 2666 ntBASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LYSMD3Q7Z3D4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 SNORD32B-201ENST00000364460 84 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 PTMAP2-201ENST00000397627 327 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 CYCSP19-201ENST00000411715 316 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 EDDM3CP-201ENST00000415977 425 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RNU6-221P-201ENST00000459541 99 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 AC008155.2-201ENST00000464337 397 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RNU1-45P-201ENST00000517191 141 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 RN7SL703P-201ENST00000578485 302 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 MIR2681-201ENST00000581814 105 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 Pinc.1-201ENST00000616452 154 ntBASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.92□□□□□ -1.78
LYSMD3Q7Z3D4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 SNORA31-201ENST00000362607 130 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 RNA5SP173-201ENST00000364857 136 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 RNU6-117P-201ENST00000365415 107 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 MIR488-201ENST00000365739 83 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 RNA5SP236-201ENST00000516169 116 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 AC007751.1-201ENST00000529260 376 ntBASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.91□□□□□ -1.78
LYSMD3Q7Z3D4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LYSMD3Q7Z3D4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.9□□□□□ -1.78
LYSMD3Q7Z3D4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 RNU6-1014P-201ENST00000383940 103 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.486-201ENST00000384398 107 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 MIR3074-201ENST00000384885 81 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP136-201ENST00000410906 107 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 AC245102.2-201ENST00000448956 180 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 RN7SL93P-201ENST00000463035 293 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 AC026726.1-201ENST00000512859 601 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 RN7SKP43-201ENST00000516173 320 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 RNU7-149P-201ENST00000516739 59 ntBASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LYSMD3Q7Z3D4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.66-201ENST00000362862 102 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.796-201ENST00000364268 102 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 Y_RNA.799-201ENST00000364992 102 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 RNA5SP97-201ENST00000365006 84 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 MIR200C-201ENST00000384980 68 ntBASIC3.89□□□□□ -1.79
LYSMD3Q7Z3D4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms