Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-1243P-201ENST00000364028 107 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RNU6-540P-201ENST00000384622 101 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AL353997.1-201ENST00000432936 108 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AC104383.1-201ENST00000530297 370 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 MIR378D2-201ENST00000580636 98 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AP002802.2-201ENST00000605877 235 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 U6.99-201ENST00000637524 83 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RNU4-66P-201ENST00000365199 138 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RNA5SP117-201ENST00000365294 118 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 MIR18B-201ENST00000454574 71 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RPL30P15-201ENST00000457129 321 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.18□□□□□ -2.6
VPS13CQ709C8 DEFB131D-201ENST00000526803 184 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 DEFB131C-201ENST00000528817 165 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AC009269.6-201ENST00000621778 588 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AP003072.5-201ENST00000623872 773 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 U2.21-201ENST00000637295 81 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 AC132825.6-201ENST00000638861 357 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RNU6-1176P-201ENST00000390955 107 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 MIR548H1-201ENST00000408610 102 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RNU6-953P-201ENST00000459154 107 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RPL39P34-201ENST00000477141 156 ntBASIC-1.18□□□□□ -2.6
VPS13CQ709C8 RNU6-1331P-201ENST00000363658 106 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 MIR660-201ENST00000385235 97 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 MIR301A-201ENST00000385261 86 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 RNU6-705P-201ENST00000410601 104 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.19□□□□□ -2.6
VPS13CQ709C8 USP9YP13-201ENST00000417797 480 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AL606517.2-201ENST00000442855 241 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 MTND2P24-201ENST00000453434 806 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AC022483.1-201ENST00000514020 567 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 RNU6-759P-201ENST00000516740 103 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AC095057.3-201ENST00000567102 1157 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AC135803.1-201ENST00000608748 565 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 HSFY7P-201ENST00000432672 318 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 HSFY8P-201ENST00000437934 318 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 HSFY5P-201ENST00000453726 309 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 RNU6-502P-201ENST00000362419 108 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 SNORA1-201ENST00000384107 130 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AL589994.1-201ENST00000404962 340 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 RNA5SP95-201ENST00000410319 137 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AC093019.1-201ENST00000443135 252 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AC008536.2-201ENST00000607284 349 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 U7.6-201ENST00000610841 64 ntBASIC-1.19□□□□□ -2.6
VPS13CQ709C8 AL603758.1-201ENST00000618654 241 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 AC018926.3-201ENST00000618841 406 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 SNORD114-6-201ENST00000364393 72 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 RNU2-43P-201ENST00000410306 190 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-1.2□□□□□ -2.6
VPS13CQ709C8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-1.2□□□□□ -2.6
VPS13CQ709C8 SCARNA4-201ENST00000629045 128 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-1.2□□□□□ -2.6
VPS13CQ709C8 SUMO1P2-201ENST00000452524 304 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 AC013828.2-201ENST00000532487 235 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 ZNF204P-201ENST00000416749 2397 ntBASIC-1.2□□□□□ -2.6
VPS13CQ709C8 RNU6-650P-201ENST00000365658 111 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC016907.1-201ENST00000419483 435 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 MTCO2P23-201ENST00000425216 680 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.21□□□□□ -2.6
VPS13CQ709C8 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.21□□□□□ -2.6
VPS13CQ709C8 ACA59.2-201ENST00000517061 156 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 SNORA63C-201ENST00000364578 129 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 PRRC2CP1-201ENST00000404428 159 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC008267.5-201ENST00000424928 265 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 MTND1P30-201ENST00000441241 901 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC009237.7-201ENST00000447357 229 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 MIR4677-201ENST00000584153 80 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 RNU6-975P-201ENST00000384296 105 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC022028.1-201ENST00000412054 408 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC013828.1-201ENST00000481845 158 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 AC006380.1-201ENST00000603598 186 ntBASIC-1.21□□□□□ -2.6
VPS13CQ709C8 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 RNU4-76P-201ENST00000364509 141 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 RPL31P54-201ENST00000429803 370 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-1.22□□□□□ -2.6
VPS13CQ709C8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-1.22□□□□□ -2.6
VPS13CQ709C8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
VPS13CQ709C8 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 SNORD64-201ENST00000386683 67 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
VPS13CQ709C8 MIR876-201ENST00000401147 81 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 ELOCP21-201ENST00000412558 336 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 AC079598.5-201ENST00000547460 117 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-1.22□□□□□ -2.6
VPS13CQ709C8 AC025588.3-201ENST00000604182 274 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 MIR1248-201ENST00000629190 106 ntBASIC-1.22□□□□□ -2.6
VPS13CQ709C8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
VPS13CQ709C8 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.22□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms