Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 RNU1-143P-201ENST00000516296 146 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 U1.23-201ENST00000610293 146 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 RNU1-68P-201ENST00000615382 146 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 FTX_2.1-201ENST00000618816 94 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 U1.39-201ENST00000621562 146 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 MIR7157-201ENST00000635801 60 ntBASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
RUFY4Q6ZNE9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.46□□□□□ -1.85
RUFY4Q6ZNE9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
RUFY4Q6ZNE9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 AL035425.3-201ENST00000564206 4996 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.76-201ENST00000362931 109 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 RNY4P28-201ENST00000365281 93 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 SNORA67.2-201ENST00000384300 149 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.590-201ENST00000410140 107 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 PIGPP3-201ENST00000425307 415 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 MRPS10P1-201ENST00000448483 130 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 RNU6-155P-201ENST00000516347 100 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 RNU2-12P-201ENST00000517216 168 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 Z83818.1-201ENST00000603584 150 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 AC004792.1-201ENST00000614523 137 ntBASIC3.46□□□□□ -1.86
RUFY4Q6ZNE9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 CD24P4-201ENST00000382840 243 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 SNORD67-201ENST00000390833 111 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 AC024067.1-201ENST00000426199 223 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 RPL23AP3-201ENST00000453844 468 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.644-201ENST00000459006 113 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.674-201ENST00000516362 113 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.679-201ENST00000516416 91 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 RN7SKP40-201ENST00000517211 242 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 AP002001.1-203ENST00000534002 267 ntBASIC3.45□□□□□ -1.86
RUFY4Q6ZNE9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 MIR411-201ENST00000362239 96 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.292-201ENST00000364904 97 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 MIR586-201ENST00000385035 97 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 AL603908.1-201ENST00000406098 201 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 U6atac.2-201ENST00000408644 118 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 RN7SKP220-201ENST00000410611 288 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 RNA5SP504-201ENST00000410676 117 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 PRELID3BP1-201ENST00000457142 540 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 SNORD2.1-201ENST00000458762 69 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 RAC1P5-201ENST00000512182 576 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 RNU6-107P-201ENST00000516643 102 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 CBX3P4-201ENST00000538909 354 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 MIR3684-201ENST00000579779 74 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 AC002064.3-201ENST00000623448 346 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 AC008264.2-201ENST00000610193 3731 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 AC135776.4-201ENST00000624300 1904 ntBASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RUFY4Q6ZNE9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.793-201ENST00000411222 111 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AC244505.4-201ENST00000434905 287 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AC107083.1-201ENST00000439643 279 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 SSXP5-201ENST00000443473 287 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 SUMO1P2-201ENST00000452524 304 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 SRIP1-201ENST00000489235 288 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 MIR3124-201ENST00000582636 67 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 AC073349.3-201ENST00000617616 186 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 MIR622-201ENST00000638396 96 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 Z82209.1-201ENST00000422141 2135 ntBASIC3.43□□□□□ -1.86
RUFY4Q6ZNE9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 SNORA71.1-201ENST00000364523 117 ntBASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 SNORA51.4-201ENST00000364993 124 ntBASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 RNU6-1062P-201ENST00000383908 107 ntBASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 RNU6-1289P-201ENST00000384431 106 ntBASIC3.42□□□□□ -1.86
RUFY4Q6ZNE9 SNORD15B-201ENST00000384714 146 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms