Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 MTCO2P27-201ENST00000420740 428 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 AL590556.1-201ENST00000423231 483 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ZNF544Q6NX49 Z82188.1-201ENST00000436709 154 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 MTCO3P10-201ENST00000455912 772 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.653-201ENST00000459091 95 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.63□□□□□ -2.15
ZNF544Q6NX49 SCARNA16.2-201ENST00000516520 172 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 RNU6-1213P-201ENST00000517075 94 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 AC022616.8-201ENST00000533569 253 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.63□□□□□ -2.15
ZNF544Q6NX49 SUB1P3-201ENST00000564581 315 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 AC133104.2-201ENST00000615272 193 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 AL132822.1-201ENST00000617063 513 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 AL353997.5-201ENST00000618886 171 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 MTND4LP32-201ENST00000636111 270 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ZNF544Q6NX49 BX322639.1-202ENST00000423987 2213 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.67-201ENST00000362870 100 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 RNY1P16-201ENST00000363063 111 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 RNU6-797P-201ENST00000363101 109 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 RNU6-331P-201ENST00000384724 107 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 MIR153-2-201ENST00000385225 87 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 SNORA12.2-201ENST00000391040 156 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.597-201ENST00000410463 100 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AC236972.2-201ENST00000434979 310 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.62□□□□□ -2.15
ZNF544Q6NX49 snoU13.6-201ENST00000458785 104 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AC132942.1-201ENST00000486753 483 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.62□□□□□ -2.15
ZNF544Q6NX49 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.62□□□□□ -2.15
ZNF544Q6NX49 NDUFA5P6-201ENST00000542110 379 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 AC090517.3-201ENST00000625170 141 ntBASIC1.62□□□□□ -2.15
ZNF544Q6NX49 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
ZNF544Q6NX49 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ZNF544Q6NX49 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ZNF544Q6NX49 AC073544.1-201ENST00000600110 1595 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 RNU1-76P-201ENST00000362903 159 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.187-201ENST00000363918 113 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.259-201ENST00000364619 101 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 SNORA25B-201ENST00000365507 128 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 RNU6-1040P-201ENST00000383974 107 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 RNU6-890P-201ENST00000384121 107 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 MIR208B-201ENST00000401172 77 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 MTCYBP10-201ENST00000424905 650 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.61□□□□□ -2.15
ZNF544Q6NX49 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.61□□□□□ -2.15
ZNF544Q6NX49 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 RPL17P19-201ENST00000489069 552 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 RNA5SP54-201ENST00000516951 92 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
ZNF544Q6NX49 AC027288.2-201ENST00000553028 243 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.61□□□□□ -2.15
ZNF544Q6NX49 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 AC126177.8-201ENST00000618339 1015 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
ZNF544Q6NX49 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.48-201ENST00000362710 103 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.58-201ENST00000362807 102 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.154-201ENST00000363624 102 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNY3P1-201ENST00000365085 102 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.315-201ENST00000365117 102 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNY3-201ENST00000365484 102 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU6-546P-201ENST00000383991 107 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU6-611P-201ENST00000384276 104 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.535-201ENST00000384612 99 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 MIR559-201ENST00000385188 96 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 SNORA12-201ENST00000391162 147 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU2-32P-201ENST00000411193 191 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 EDDM3CP-201ENST00000415977 425 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 CKS1BP2-201ENST00000497342 240 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU7-175P-201ENST00000515915 61 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU6-470P-201ENST00000515954 104 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU6-1198P-201ENST00000516904 67 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AC026470.2-201ENST00000561492 181 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 7SK.7-201ENST00000603504 247 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 CYP2C61P-201ENST00000604072 290 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AL133255.1-201ENST00000606374 441 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AL050343.2-201ENST00000607338 280 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 AC100812.1-201ENST00000607622 580 ntBASIC1.6□□□□□ -2.15
ZNF544Q6NX49 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF544Q6NX49 RNU6-1115P-201ENST00000362490 106 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 RNA5SP99-201ENST00000364020 114 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.319-201ENST00000365138 92 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms