Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC112771.1-201ENST00000463581 102 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 SNORA64.4-201ENST00000516632 81 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 MIR3144-201ENST00000579460 79 ntBASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PRPF40BQ6NWY9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 SNORD56.3-201ENST00000363507 71 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 SNORD87-201ENST00000364849 89 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 SNORA18.2-201ENST00000383865 132 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AL139281.1-201ENST00000422120 335 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AIMP1P2-201ENST00000425294 312 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 RPL23AP70-201ENST00000483361 460 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 HMGB3P3-201ENST00000510526 400 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-344P-201ENST00000516635 111 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AL391813.1-201ENST00000603098 260 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AL008718.3-201ENST00000610217 321 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AC073476.4-201ENST00000628409 72 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AC068205.3-201ENST00000636385 468 ntBASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF40BQ6NWY9 AL136360.1-201ENST00000503377 1900 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 RNU4-15P-201ENST00000362613 141 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 RNU1-57P-201ENST00000384491 166 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 SNORD15B-201ENST00000384714 146 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 MIR613-201ENST00000385248 95 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 AL139095.1-201ENST00000404326 391 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 U3.40-201ENST00000408706 208 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 HMGN2P20-201ENST00000437531 273 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 RN7SKP132-201ENST00000516001 208 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 RNU7-200P-201ENST00000516105 62 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-346P-201ENST00000516288 111 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 RNU2-12P-201ENST00000517216 168 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 ELOCP29-201ENST00000588193 334 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 AL670379.2-201ENST00000604983 252 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 AC004832.4-201ENST00000608952 331 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.85□□□□□ -1.79
PRPF40BQ6NWY9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 AC007256.1-201ENST00000392253 2765 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 RNU6-653P-201ENST00000363074 106 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 Y_RNA.398-201ENST00000383952 99 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 MIR767-201ENST00000390228 109 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 AC022018.1-201ENST00000430685 241 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 RPS3P1-201ENST00000456781 192 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 AL031183.1-201ENST00000457667 207 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 RN7SL330P-201ENST00000469709 307 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 RPL36AP48-201ENST00000485521 314 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 RNA5SP367-201ENST00000516557 118 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 MTND5P41-201ENST00000517498 206 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 HSPE1P18-201ENST00000517602 280 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 AC026241.1-201ENST00000517873 2142 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 MIR4319-201ENST00000577285 85 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 MIR4474-201ENST00000579189 78 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 MIR7153-201ENST00000637758 57 ntBASIC3.84□□□□□ -1.79
PRPF40BQ6NWY9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRPF40BQ6NWY9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 RNU1-105P-201ENST00000363470 161 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 RNU4-17P-201ENST00000365598 141 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 SNORD67-201ENST00000390833 111 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AC105272.1-201ENST00000438604 198 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AC091179.1-201ENST00000461606 579 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AL049830.2-201ENST00000480072 201 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PRPF40BQ6NWY9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AC069528.2-201ENST00000624849 1991 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AC004866.1-201ENST00000411748 78 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 TOMM22P2-201ENST00000430735 237 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AC108938.1-201ENST00000451204 136 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 RNU2-44P-201ENST00000516795 194 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AP001485.1-201ENST00000604799 199 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 AC108706.1-201ENST00000611053 297 ntBASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40BQ6NWY9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 MIR22-201ENST00000362190 85 ntBASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRPF40BQ6NWY9 RNU6-394P-201ENST00000410735 107 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms