Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 Y_RNA.390-201ENST00000383932 102 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 SNORA48.1-201ENST00000390879 135 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 RNU6-159P-201ENST00000391080 106 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 MIR1289-2-201ENST00000408360 111 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 MTCYBP10-201ENST00000424905 650 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AL121579.1-201ENST00000555129 305 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 MIR4801-201ENST00000582704 82 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AL159152.1-201ENST00000635019 2587 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 AC245060.5-201ENST00000610778 3293 ntBASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SNX30Q5VWJ9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 SNORA8-201ENST00000384574 139 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 MIR549A-201ENST00000385268 96 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 RNA5SP501-201ENST00000410990 112 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 RNU6-498P-201ENST00000459468 107 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 RNU6-856P-201ENST00000516959 98 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 AC025253.1-201ENST00000613623 543 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 AC083806.3-201ENST00000614016 455 ntBASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SNX30Q5VWJ9 MIR340-201ENST00000362125 95 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 RNU6-873P-201ENST00000363833 107 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 RNU6-975P-201ENST00000384296 105 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 MIR487A-201ENST00000385009 80 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 SNORA75.4-201ENST00000391278 119 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 RPL23AP50-201ENST00000434149 455 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 HMGN2P9-201ENST00000476875 229 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 HMGN1P12-201ENST00000499125 195 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 MIR4299-201ENST00000577899 72 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 AL355073.2-201ENST00000612106 557 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 AC005296.1-201ENST00000616145 209 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 MIR7843-201ENST00000622274 79 ntBASIC2.09□□□□□ -2.07
SNX30Q5VWJ9 Y_RNA.48-201ENST00000362710 103 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 RNY1P16-201ENST00000363063 111 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 RNU6-418P-201ENST00000384035 107 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AC004866.1-201ENST00000411748 78 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AC007098.1-201ENST00000420122 367 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 USP9YP16-201ENST00000430287 407 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MTCO3P29-201ENST00000432119 779 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 USP9YP23-201ENST00000455085 407 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 RNA5SP57-201ENST00000459463 123 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 RPL7P42-201ENST00000481005 679 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AC093303.1-201ENST00000514549 295 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 RNU6-1114P-201ENST00000516022 107 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 RNU1-117P-201ENST00000517041 158 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MIR5701-3-201ENST00000578890 82 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MIR5690-201ENST00000583739 73 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MIR5701-1-201ENST00000585138 82 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 UBE2V2P2-201ENST00000587677 504 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AL355802.3-201ENST00000607571 545 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 MIR5701-2-201ENST00000615634 82 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 AC068205.3-201ENST00000636385 468 ntBASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SNX30Q5VWJ9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 RNU6-793P-201ENST00000384233 104 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 RNU1-139P-201ENST00000391307 165 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AL356432.1-201ENST00000405809 419 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 MTND3P23-201ENST00000431980 347 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AP000870.1-201ENST00000472927 406 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AC097473.1-201ENST00000508142 408 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AC005730.3-201ENST00000583067 366 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AC113139.1-201ENST00000605049 239 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 AC005014.2-201ENST00000607795 599 ntBASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.07□□□□□ -2.08
SNX30Q5VWJ9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms