Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 Y_RNA.319-201ENST00000365138 92 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 RNU6-574P-201ENST00000384265 107 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 MIR504-201ENST00000385065 83 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 MIR548F4-201ENST00000408515 105 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 WARS2P1-201ENST00000429678 537 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 snoU13.14-201ENST00000459372 104 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 AC010655.3-201ENST00000478818 450 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 RNU2-53P-201ENST00000516257 147 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 Y_RNA.715-201ENST00000517082 110 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.58□□□□□ -2
TTC39AQ5SRH9 AC022616.4-201ENST00000522985 181 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 IGKV3-31-201ENST00000523109 329 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
TTC39AQ5SRH9 MIR3136-201ENST00000583498 78 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 AL034555.1-201ENST00000604816 211 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 AC008121.3-201ENST00000618726 433 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.58□□□□□ -2
TTC39AQ5SRH9 MIR219B-201ENST00000637023 88 ntBASIC2.58□□□□□ -2
TTC39AQ5SRH9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
TTC39AQ5SRH9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU6-378P-201ENST00000384324 107 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 MIR568-201ENST00000385036 95 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU6-1093P-201ENST00000391194 107 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 MIR208B-201ENST00000401172 77 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.57□□□□□ -2
TTC39AQ5SRH9 snoU13.15-201ENST00000459407 104 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 MRPS35P2-201ENST00000508242 191 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 AC023141.11-201ENST00000508864 202 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU6-397P-201ENST00000516226 104 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU6-911P-201ENST00000516523 104 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU6-58P-201ENST00000517143 103 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 AC109329.1-201ENST00000518744 317 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 AC131281.1-201ENST00000522984 164 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 MIR5695-201ENST00000579717 85 ntBASIC2.57□□□□□ -2
TTC39AQ5SRH9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.57□□□□□ -2
TTC39AQ5SRH9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.57□□□□□ -2
TTC39AQ5SRH9 RNU4-15P-201ENST00000362613 141 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 RNU6-238P-201ENST00000363313 106 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 Y_RNA.210-201ENST00000364161 110 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 Y_RNA.512-201ENST00000384518 102 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 CBX3P9-201ENST00000402326 552 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 MIR1252-201ENST00000408861 65 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 MTCO3P19-201ENST00000415864 321 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.56□□□□□ -2
TTC39AQ5SRH9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.56□□□□□ -2
TTC39AQ5SRH9 AC073901.1-201ENST00000462471 408 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 AC010469.2-201ENST00000496412 480 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 AC093852.1-201ENST00000503587 266 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 RNU6-635P-201ENST00000516651 102 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 AL442163.3-201ENST00000554110 156 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 MYL12BP1-201ENST00000569826 507 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 RPS29P30-201ENST00000600975 111 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 MIR7157-201ENST00000635801 60 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TTC39AQ5SRH9 AC005336.3-201ENST00000623833 2679 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.56□□□□□ -2
TTC39AQ5SRH9 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
TTC39AQ5SRH9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
TTC39AQ5SRH9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TTC39AQ5SRH9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 RNA5SP361-201ENST00000362686 118 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 Y_RNA.144-201ENST00000363521 113 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 RNU6-879P-201ENST00000364328 108 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 RNU4-56P-201ENST00000364700 142 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 MIR218-1-201ENST00000384999 110 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 MIR10B-201ENST00000385011 110 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 RNA5SP213-201ENST00000391031 106 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 EIF4EP4-201ENST00000424916 578 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 EIF1P2-201ENST00000428233 350 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 AC140059.1-201ENST00000489238 361 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 RNU6-1114P-201ENST00000516022 107 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 RNU6-567P-201ENST00000516746 107 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 CYP4A27P-201ENST00000567218 190 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 AC090517.1-201ENST00000569307 266 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 MIR3923-201ENST00000579521 83 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.55□□□□□ -2
TTC39AQ5SRH9 AL390123.1-201ENST00000603216 237 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 RAC1P9-201ENST00000604990 392 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 AC137590.2-201ENST00000619709 240 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 U6.92-201ENST00000636464 89 ntBASIC2.55□□□□□ -2
TTC39AQ5SRH9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
TTC39AQ5SRH9 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 RNA5SP432-201ENST00000362480 116 ntBASIC2.54□□□□□ -2
TTC39AQ5SRH9 Y_RNA.27-201ENST00000362540 103 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms