Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC099799.1-201ENST00000439809 192 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC091179.3-201ENST00000474761 144 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC026436.1-201ENST00000510537 270 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC38Q502W7 RNU6-948P-201ENST00000516374 107 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 MIR2355-201ENST00000517199 87 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC38Q502W7 AC093023.1-201ENST00000547375 507 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 CYP2C61P-201ENST00000604072 290 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 AL078596.1-201ENST00000624856 447 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
CCDC38Q502W7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC38Q502W7 RNU6-23P-201ENST00000363283 107 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 Y_RNA.315-201ENST00000365117 102 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 SNORA69.1-201ENST00000390904 137 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 RNA5SP504-201ENST00000410676 117 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 RNA5SP450-201ENST00000411206 102 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC009963.1-201ENST00000417265 157 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC091144.1-201ENST00000519573 138 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC144568.1-201ENST00000520139 137 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AP002770.2-201ENST00000543613 532 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 MIR3169-201ENST00000578032 83 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC38Q502W7 AL590240.4-201ENST00000616908 390 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC087588.2-201ENST00000617667 426 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC243829.7-201ENST00000633081 225 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC009487.4-201ENST00000624969 3585 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 AC073544.1-201ENST00000600110 1595 ntBASIC2.4□□□□□ -2.03
CCDC38Q502W7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CCDC38Q502W7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC38Q502W7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC38Q502W7 RNU6-418P-201ENST00000384035 107 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 Y_RNA.431-201ENST00000384086 102 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 Y_RNA.509-201ENST00000384506 99 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 AC114482.1-201ENST00000418010 247 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC38Q502W7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC38Q502W7 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC38Q502W7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 AC105758.1-201ENST00000506038 399 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 CYCSP23-201ENST00000519781 313 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 AC125232.2-201ENST00000592457 143 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC38Q502W7 AL133255.1-201ENST00000606374 441 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 AC013412.1-201ENST00000610687 192 ntBASIC2.39□□□□□ -2.03
CCDC38Q502W7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC38Q502W7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC38Q502W7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AL355497.1-201ENST00000406262 551 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RNU2-40P-201ENST00000410833 196 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 HMGN2P38-201ENST00000423806 265 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 MTND2P29-201ENST00000438595 412 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 IPO7P1-201ENST00000442031 636 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AC010095.1-201ENST00000443543 144 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC38Q502W7 U8.22-201ENST00000459141 133 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RNU6-498P-201ENST00000459468 107 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RN7SL429P-201ENST00000479090 223 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RN7SL489P-201ENST00000486185 223 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RN7SL327P-201ENST00000488659 223 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 RNU6-699P-201ENST00000517081 110 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AP005660.1-201ENST00000522972 293 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AC021269.2-201ENST00000532318 330 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 MTND5P35-201ENST00000557537 1720 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC38Q502W7 MZT1P2-201ENST00000604387 248 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC38Q502W7 RN7SL853P-201ENST00000617250 223 ntBASIC2.38□□□□□ -2.03
CCDC38Q502W7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC38Q502W7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC38Q502W7 RNU6-727P-201ENST00000363592 107 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 RNU6-879P-201ENST00000364328 108 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 MIR597-201ENST00000384968 97 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 MIR329-1-201ENST00000385028 80 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 RNU6-1001P-201ENST00000411265 100 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC38Q502W7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC38Q502W7 RNU7-57P-201ENST00000459540 60 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 AC234781.5-201ENST00000508429 271 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC38Q502W7 RNU6-856P-201ENST00000516959 98 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 AC022868.1-201ENST00000517767 391 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC38Q502W7 AC103810.6-201ENST00000606708 136 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 AC116312.1-201ENST00000606841 314 ntBASIC2.37□□□□□ -2.03
CCDC38Q502W7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC38Q502W7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms