Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RNU6-1310P-201ENST00000384153 107 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 RNU2-20P-201ENST00000410425 191 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 RNU2-32P-201ENST00000411193 191 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AL390729.2-201ENST00000416137 156 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 RPL21P38-201ENST00000418090 167 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AC003982.1-202ENST00000469928 248 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AL049873.1-201ENST00000480540 376 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AC098869.1-201ENST00000481627 292 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AC022616.8-201ENST00000533569 253 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AC090616.3-201ENST00000582184 217 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 AC009487.2-201ENST00000420969 6821 ntBASIC2.77□□□□□ -1.97
KHDC1Q4VXA5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 MIR410-201ENST00000362222 80 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.396-201ENST00000383949 103 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.461-201ENST00000384263 103 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RNU6-472P-201ENST00000384299 107 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 MIR586-201ENST00000385035 97 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 MIR561-201ENST00000385216 97 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 MIR300-201ENST00000401138 83 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RNA5SP504-201ENST00000410676 117 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RAB28P5-201ENST00000427490 651 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 AC092427.1-202ENST00000430569 476 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 NDUFB4P10-201ENST00000452541 359 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RNU7-14P-201ENST00000459331 62 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.668-201ENST00000516233 93 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RNA5SP367-201ENST00000516557 118 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 RNU1-117P-201ENST00000517041 158 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 AC109329.2-201ENST00000519658 482 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 AC005176.2-201ENST00000596933 147 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 AC008873.1-201ENST00000625051 138 ntBASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KHDC1Q4VXA5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 snoU2_19.2-201ENST00000363024 80 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 RNU1-23P-201ENST00000363361 144 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 SNORD113-8-201ENST00000363497 74 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 SNORD87-201ENST00000364849 89 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.570-201ENST00000384750 101 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 MT-TW-201ENST00000387382 68 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.581-201ENST00000391017 97 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 RNA5SP475-201ENST00000410568 110 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC096920.1-201ENST00000423991 241 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC087499.2-201ENST00000432861 149 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 SEPT14P8-201ENST00000508026 178 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 SNORA9.3-201ENST00000516383 129 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 GTF3AP2-201ENST00000557014 266 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC011373.1-201ENST00000607270 237 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 AC010297.1-201ENST00000623948 149 ntBASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
KHDC1Q4VXA5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.84-201ENST00000363011 104 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 U3.8-201ENST00000363675 217 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 RNA5SP125-201ENST00000364843 120 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 Y_RNA.288-201ENST00000364854 92 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 RNU6-1264P-201ENST00000383891 107 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 AL139095.1-201ENST00000404326 391 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 TRBVB-201ENST00000477100 408 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 RNU6-965P-201ENST00000516721 96 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 SNORD113-5-201ENST00000607261 78 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 MIR7106-201ENST00000612419 65 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 MIR3674-201ENST00000636576 68 ntBASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.74□□□□□ -1.97
KHDC1Q4VXA5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 RNU6-1175P-201ENST00000365200 107 ntBASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 RNU6-1026P-201ENST00000384465 108 ntBASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 MIR215-201ENST00000384858 110 ntBASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 MIR1283-1-201ENST00000408494 87 ntBASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 RNU6-1203P-201ENST00000410703 110 ntBASIC2.73□□□□□ -1.97
KHDC1Q4VXA5 RNU2-25P-201ENST00000411041 191 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms