Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNY3P2-201ENST00000362918 102 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RNU6-979P-201ENST00000383896 107 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 SNORA1-201ENST00000384107 130 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 SNORA67.2-201ENST00000384300 149 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 SNORA26-201ENST00000391286 122 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 MIR889-201ENST00000401280 79 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 AL355796.1-201ENST00000406706 323 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 AC080013.2-201ENST00000460866 323 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RPL23AP67-201ENST00000465341 474 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RN7SL323P-201ENST00000494712 295 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 AC083906.5-201ENST00000503722 328 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RNU7-61P-201ENST00000515897 61 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 SCARNA23-201ENST00000516060 130 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RNU6-240P-201ENST00000516098 97 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RNU6-1018P-201ENST00000516577 106 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RNU6-63P-201ENST00000516690 95 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 RNU2-44P-201ENST00000516795 194 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 MIR4666B-201ENST00000578142 81 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 AL034555.1-201ENST00000604816 211 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 MIR6868-201ENST00000611215 58 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 Pinc.1-201ENST00000616452 154 ntBASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 SNORA60-201ENST00000362396 134 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 RNU6-884P-201ENST00000363889 107 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 SNORA4.2-201ENST00000365313 147 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 MT-TI-201ENST00000387365 69 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 SNORD66.1-201ENST00000391230 76 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 RNU2-58P-201ENST00000516403 183 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 DEFB131E-201ENST00000532329 154 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 AL451007.1-201ENST00000595491 289 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 AL929325.1-201ENST00000603096 117 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 AC107294.3-201ENST00000609211 526 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 AC002064.3-201ENST00000623448 346 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 U6.105-201ENST00000637379 88 ntBASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CTC1Q2NKJ3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 RNA5SP72-201ENST00000364442 117 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 MIR1179-201ENST00000408703 91 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 RNA5SP201-201ENST00000410316 124 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 HMGN2P31-201ENST00000432430 273 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC023449.1-201ENST00000454464 154 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC096725.1-201ENST00000514266 313 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 RNY4P20-201ENST00000516678 93 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 RNU6-1149P-201ENST00000516810 97 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC011602.1-201ENST00000546484 331 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 MIR4298-201ENST00000584380 73 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 MIR5684-201ENST00000585074 65 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC093732.2-201ENST00000607950 274 ntBASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTC1Q2NKJ3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.73
CTC1Q2NKJ3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CTC1Q2NKJ3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 RNU6-1240P-201ENST00000365155 104 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 Y_RNA.486-201ENST00000384398 107 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 MIR3074-201ENST00000384885 81 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 NDUFB4P4-201ENST00000404822 243 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 RNU6-402P-201ENST00000410678 103 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 SNORA59A-201ENST00000459326 152 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 EIF4A1P12-201ENST00000551910 141 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 AC105137.2-201ENST00000569073 466 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 U7.3-201ENST00000616123 62 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.27□□□□□ -1.73
CTC1Q2NKJ3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 FAM35DP-201ENST00000323387 2712 ntBASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 AC002543.1-201ENST00000299783 1954 ntBASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 SNORD114-7-201ENST00000362520 77 ntBASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 Y_RNA.66-201ENST00000362862 102 ntBASIC4.26□□□□□ -1.73
CTC1Q2NKJ3 RNU4-36P-201ENST00000364294 144 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms