Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL606534.2-204ENST00000635008 178 ntBASIC2.32□□□□□ -2.04
PDS5AQ29RF7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDS5AQ29RF7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
PDS5AQ29RF7 AC080128.1-201ENST00000474389 1917 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 RNU1-72P-201ENST00000362976 153 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 RNU4-42P-201ENST00000364738 142 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 HMGB3P2-201ENST00000411913 584 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 CHEK2P4-201ENST00000450340 246 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 snoU13.6-201ENST00000458785 104 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 AC007215.1-201ENST00000464893 276 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 RNU6-475P-201ENST00000516073 104 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 RNU6-911P-201ENST00000516523 104 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 RNU6-58P-201ENST00000517143 103 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 SNORD58B-201ENST00000607313 66 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 AC069294.1-201ENST00000608397 350 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PDS5AQ29RF7 AC135776.4-201ENST00000624300 1904 ntBASIC2.31□□□□□ -2.04
PDS5AQ29RF7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PDS5AQ29RF7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.3□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.158-201ENST00000363651 101 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 MIR218-1-201ENST00000384999 110 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 RNU6-482P-201ENST00000391068 107 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 MRPL42P3-201ENST00000401492 326 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 AL160004.2-201ENST00000432935 350 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.3□□□□□ -2.04
PDS5AQ29RF7 TOMM22P6-201ENST00000465035 409 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.3□□□□□ -2.04
PDS5AQ29RF7 RNA5SP54-201ENST00000516951 92 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.3□□□□□ -2.04
PDS5AQ29RF7 MIR3199-1-201ENST00000582434 88 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 AL138963.2-201ENST00000605137 226 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 MIR4272-201ENST00000635924 64 ntBASIC2.3□□□□□ -2.04
PDS5AQ29RF7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDS5AQ29RF7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDS5AQ29RF7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 RNU6-639P-201ENST00000384074 107 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 RNU6-378P-201ENST00000384324 107 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 RNA5SP213-201ENST00000391031 106 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDS5AQ29RF7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 SNORA40.14-201ENST00000516543 86 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 MIR2355-201ENST00000517199 87 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC027288.2-201ENST00000553028 243 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC090617.3-201ENST00000573670 475 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC006504.6-201ENST00000590142 199 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 VN1R91P-201ENST00000594377 169 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC040896.1-201ENST00000613819 479 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AL138825.1-201ENST00000618587 192 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC005592.1-201ENST00000566527 1640 ntBASIC2.29□□□□□ -2.04
PDS5AQ29RF7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDS5AQ29RF7 MTND5P16-201ENST00000460269 1703 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNY3P11-201ENST00000364153 102 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNA5SP138-201ENST00000365098 114 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNU6-738P-201ENST00000384531 106 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNU6-541P-201ENST00000384709 110 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 MIR606-201ENST00000384851 96 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 MIR9-3-201ENST00000385084 90 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNU6-159P-201ENST00000391080 106 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC114482.1-201ENST00000418010 247 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC096644.2-201ENST00000429278 159 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 RNU7-169P-201ENST00000459456 61 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC140059.1-201ENST00000489238 361 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC145146.1-201ENST00000496370 254 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC091144.1-201ENST00000519573 138 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AC105245.1-201ENST00000581934 244 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 MIR3117-201ENST00000584034 78 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 MIR3616-201ENST00000584070 92 ntBASIC2.28□□□□□ -2.04
PDS5AQ29RF7 AL713866.2-201ENST00000603579 219 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms