Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 MIR183-201ENST00000384958 110 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 AL441985.1-201ENST00000457727 251 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 HMGN1P7-201ENST00000491722 313 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXC1Q12948 RNU2-35P-201ENST00000516446 142 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 RNU7-6P-201ENST00000516845 62 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 RNU7-172P-201ENST00000517125 64 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 MIR3618-201ENST00000580330 88 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 MIR3683-201ENST00000580847 82 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 MIR4668-201ENST00000582284 70 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXC1Q12948 U3.45-201ENST00000607547 219 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXC1Q12948 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXC1Q12948 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
FOXC1Q12948 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
FOXC1Q12948 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
FOXC1Q12948 LINC01355-201ENST00000566551 5444 ntBASIC4□□□□□ -1.77
FOXC1Q12948 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
FOXC1Q12948 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXC1Q12948 SNORD38C-201ENST00000384381 69 ntBASIC4□□□□□ -1.77
FOXC1Q12948 Y_RNA.507-201ENST00000384500 99 ntBASIC4□□□□□ -1.77
FOXC1Q12948 RNVU1-14-201ENST00000384770 164 ntBASIC4□□□□□ -1.77
FOXC1Q12948 RN7SKP57-201ENST00000517248 293 ntBASIC4□□□□□ -1.77
FOXC1Q12948 MIR3936-201ENST00000584304 110 ntBASIC4□□□□□ -1.77
FOXC1Q12948 MIR4438-201ENST00000585271 93 ntBASIC4□□□□□ -1.77
FOXC1Q12948 U6.105-201ENST00000637379 88 ntBASIC4□□□□□ -1.77
FOXC1Q12948 AC091304.10-201ENST00000641554 121 ntBASIC4□□□□□ -1.77
FOXC1Q12948 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
FOXC1Q12948 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4□□□□□ -1.77
FOXC1Q12948 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXC1Q12948 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4□□□□□ -1.77
FOXC1Q12948 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXC1Q12948 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXC1Q12948 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXC1Q12948 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXC1Q12948 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXC1Q12948 RNU6-363P-201ENST00000362895 105 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 Y_RNA.94-201ENST00000363068 106 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 Y_RNA.96-201ENST00000363092 109 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 RNU6-418P-201ENST00000384035 107 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 COX5BP7-201ENST00000414780 274 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 RPL32P35-201ENST00000415214 394 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 RNU6-948P-201ENST00000516374 107 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 RNU6-1096P-201ENST00000517089 102 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 AC073308.1-201ENST00000623696 305 ntBASIC3.99□□□□□ -1.77
FOXC1Q12948 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXC1Q12948 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXC1Q12948 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXC1Q12948 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXC1Q12948 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXC1Q12948 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
FOXC1Q12948 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXC1Q12948 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXC1Q12948 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXC1Q12948 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXC1Q12948 SNORD115-19-201ENST00000363098 82 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 SNORD115-18-201ENST00000363293 82 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU1-96P-201ENST00000364163 162 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 SNORD115-17-201ENST00000364612 82 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU1-63P-201ENST00000383902 164 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU6-1235P-201ENST00000384559 107 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU2-49P-201ENST00000410666 184 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 AL353813.1-201ENST00000440700 253 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU1-131P-201ENST00000458943 161 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU6-498P-201ENST00000459468 107 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RN7SL323P-201ENST00000494712 295 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RPL23AP94-201ENST00000512518 302 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 AC079598.5-201ENST00000547460 117 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXC1Q12948 AC091178.1-203ENST00000584586 279 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 RNU1-30P-201ENST00000606575 163 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXC1Q12948 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXC1Q12948 MIR1255B1-201ENST00000636325 63 ntBASIC3.98□□□□□ -1.77
FOXC1Q12948 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXC1Q12948 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXC1Q12948 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXC1Q12948 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXC1Q12948 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXC1Q12948 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXC1Q12948 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXC1Q12948 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
FOXC1Q12948 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 AL136964.1-201ENST00000622038 2990 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXC1Q12948 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXC1Q12948 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
FOXC1Q12948 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms