Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 MIR4771-2-201ENST00000577758 74 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 MIR4771-1-201ENST00000582617 74 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC112220.3-201ENST00000605502 502 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC017083.3-201ENST00000609955 700 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 SNORD3E-202ENST00000627253 216 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 SNORA1B-201ENST00000362535 133 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 SNORD114-19-201ENST00000363072 75 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RNY4P28-201ENST00000365281 93 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RNU6-25P-201ENST00000383873 107 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RNU6-15P-201ENST00000384534 107 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 SNORA2B-201ENST00000384583 137 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RNU6-29P-201ENST00000384637 107 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RNU6-535P-201ENST00000384722 107 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 MIR217-201ENST00000384817 110 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RNA5SP300-201ENST00000391197 107 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 MTCO2P12-201ENST00000427426 682 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 HSFY7P-201ENST00000432672 318 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 TIMM9P1-201ENST00000436122 256 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 HSFY8P-201ENST00000437934 318 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL7A1Q02388 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC104563.1-201ENST00000476147 376 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 OR9P1P-201ENST00000496431 281 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 HMGB1P28-201ENST00000507778 552 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC010468.3-201ENST00000508225 458 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC079395.1-201ENST00000510981 262 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL7A1Q02388 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC090615.1-201ENST00000577519 154 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC025627.3-201ENST00000582078 182 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.02□□□□□ -2.41
COL7A1Q02388 BNIP3P9-201ENST00000603714 553 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AL355598.1-201ENST00000604169 202 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 RPL17P51-201ENST00000605218 238 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC018462.2-201ENST00000605375 395 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL7A1Q02388 AC106754.2-201ENST00000623006 233 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 AP000676.3-201ENST00000623299 569 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 OR5AK4P-201ENST00000635912 903 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL7A1Q02388 MTND5P17-201ENST00000418405 1603 ntBASIC-0.02□□□□□ -2.41
COL7A1Q02388 ZNF204P-201ENST00000416749 2397 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 SNORD32A-201ENST00000364805 84 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-61P-201ENST00000365528 109 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-549P-201ENST00000384433 107 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 MIR526A1-201ENST00000384897 85 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RPS20P2-201ENST00000402520 389 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 MIR1302-7-201ENST00000408841 72 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC016909.1-201ENST00000415916 166 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 BX664727.1-201ENST00000416024 466 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 TIMM9P2-201ENST00000419324 266 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 MTCO2P34-201ENST00000421994 607 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AL590135.1-201ENST00000422215 156 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AL953862.1-201ENST00000423016 168 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC019205.3-201ENST00000424573 156 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 GTF2IP3-201ENST00000433887 494 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 MTND2P20-201ENST00000440805 661 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 STAG3L5P-204ENST00000443759 179 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC016700.2-201ENST00000446011 156 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC079354.2-201ENST00000453523 154 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 SNORD126-201ENST00000459475 77 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC104629.1-201ENST00000494226 508 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC015911.1-201ENST00000495111 156 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC114811.1-201ENST00000507207 168 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RBBP4P6-201ENST00000508098 202 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 SNORA25.12-201ENST00000516202 82 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-572P-201ENST00000516724 80 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC026616.1-201ENST00000523157 525 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AP001328.1-201ENST00000528550 176 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC104383.1-201ENST00000530297 370 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AP002001.1-203ENST00000534002 267 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AP000763.2-201ENST00000540641 163 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 MIR5708-201ENST00000579723 85 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 MIR4804-201ENST00000581683 73 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC008752.3-201ENST00000588113 712 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.03□□□□□ -2.41
COL7A1Q02388 AL162424.1-201ENST00000602325 221 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 DEFB131E-202ENST00000602581 683 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC006380.1-201ENST00000603598 186 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC116165.2-201ENST00000616705 206 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC231657.1-201ENST00000624313 397 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 MTND5P42-201ENST00000637720 498 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 AC099786.3-201ENST00000565735 1410 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-545P-201ENST00000362681 104 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-552P-201ENST00000362869 119 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 RNU6-137P-201ENST00000363680 108 ntBASIC-0.03□□□□□ -2.41
COL7A1Q02388 SNORD115-8-201ENST00000363856 82 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms