Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR449C-201ENST00000516047 92 ntBASIC2.48□□□□□ -2.01
RAE1P78406 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
RAE1P78406 Y_RNA.668-201ENST00000516233 93 ntBASIC2.48□□□□□ -2.01
RAE1P78406 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.48□□□□□ -2.01
RAE1P78406 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.48□□□□□ -2.01
RAE1P78406 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.48□□□□□ -2.01
RAE1P78406 AC078899.3-201ENST00000599065 212 ntBASIC2.48□□□□□ -2.01
RAE1P78406 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
RAE1P78406 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
RAE1P78406 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RAE1P78406 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RAE1P78406 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
RAE1P78406 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.47□□□□□ -2.01
RAE1P78406 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.47□□□□□ -2.01
RAE1P78406 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RAE1P78406 MIR410-201ENST00000362222 80 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RNU1-23P-201ENST00000363361 144 ntBASIC2.47□□□□□ -2.01
RAE1P78406 Y_RNA.193-201ENST00000363979 102 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RNU6-1264P-201ENST00000383891 107 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RNU6-546P-201ENST00000383991 107 ntBASIC2.47□□□□□ -2.01
RAE1P78406 Y_RNA.461-201ENST00000384263 103 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RNU6-472P-201ENST00000384299 107 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RNU6-937P-201ENST00000384325 106 ntBASIC2.47□□□□□ -2.01
RAE1P78406 Y_RNA.518-201ENST00000384552 113 ntBASIC2.47□□□□□ -2.01
RAE1P78406 Y_RNA.570-201ENST00000384750 101 ntBASIC2.47□□□□□ -2.01
RAE1P78406 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RAE1P78406 RNU5A-5P-201ENST00000411054 116 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RNU2-32P-201ENST00000411193 191 ntBASIC2.47□□□□□ -2.01
RAE1P78406 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.47□□□□□ -2.01
RAE1P78406 RPL21P38-201ENST00000418090 167 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RAB28P5-201ENST00000427490 651 ntBASIC2.47□□□□□ -2.01
RAE1P78406 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.47□□□□□ -2.01
RAE1P78406 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.47□□□□□ -2.01
RAE1P78406 RNU1-117P-201ENST00000517041 158 ntBASIC2.47□□□□□ -2.01
RAE1P78406 RN7SKP40-201ENST00000517211 242 ntBASIC2.47□□□□□ -2.01
RAE1P78406 AC109329.2-201ENST00000519658 482 ntBASIC2.47□□□□□ -2.01
RAE1P78406 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.47□□□□□ -2.01
RAE1P78406 U6.104-201ENST00000637979 90 ntBASIC2.47□□□□□ -2.01
RAE1P78406 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
RAE1P78406 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RAE1P78406 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
RAE1P78406 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.47□□□□□ -2.01
RAE1P78406 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RAE1P78406 RNU6-626P-201ENST00000363354 107 ntBASIC2.46□□□□□ -2.02
RAE1P78406 Y_RNA.396-201ENST00000383949 103 ntBASIC2.46□□□□□ -2.02
RAE1P78406 Y_RNA.401-201ENST00000383965 117 ntBASIC2.46□□□□□ -2.02
RAE1P78406 RNU6-20P-201ENST00000384106 107 ntBASIC2.46□□□□□ -2.02
RAE1P78406 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
RAE1P78406 Y_RNA.581-201ENST00000391017 97 ntBASIC2.46□□□□□ -2.02
RAE1P78406 MIR1302-6-201ENST00000408466 90 ntBASIC2.46□□□□□ -2.02
RAE1P78406 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.46□□□□□ -2.02
RAE1P78406 AL390729.2-201ENST00000416137 156 ntBASIC2.46□□□□□ -2.02
RAE1P78406 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.46□□□□□ -2.02
RAE1P78406 NDUFB4P10-201ENST00000452541 359 ntBASIC2.46□□□□□ -2.02
RAE1P78406 AC007536.1-201ENST00000533382 349 ntBASIC2.46□□□□□ -2.02
RAE1P78406 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.46□□□□□ -2.02
RAE1P78406 AC005176.2-201ENST00000596933 147 ntBASIC2.46□□□□□ -2.02
RAE1P78406 AL355297.2-201ENST00000604792 129 ntBASIC2.46□□□□□ -2.02
RAE1P78406 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RAE1P78406 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.46□□□□□ -2.02
RAE1P78406 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RAE1P78406 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RAE1P78406 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.45□□□□□ -2.02
RAE1P78406 U3.8-201ENST00000363675 217 ntBASIC2.45□□□□□ -2.02
RAE1P78406 RNA5SP125-201ENST00000364843 120 ntBASIC2.45□□□□□ -2.02
RAE1P78406 SNORD87-201ENST00000364849 89 ntBASIC2.45□□□□□ -2.02
RAE1P78406 Y_RNA.376-201ENST00000365638 108 ntBASIC2.45□□□□□ -2.02
RAE1P78406 Y_RNA.498-201ENST00000384460 102 ntBASIC2.45□□□□□ -2.02
RAE1P78406 MIR300-201ENST00000401138 83 ntBASIC2.45□□□□□ -2.02
RAE1P78406 SNORA11.1-201ENST00000408133 129 ntBASIC2.45□□□□□ -2.02
RAE1P78406 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
RAE1P78406 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.45□□□□□ -2.02
RAE1P78406 AL139281.1-201ENST00000422120 335 ntBASIC2.45□□□□□ -2.02
RAE1P78406 TOMM22P2-201ENST00000430735 237 ntBASIC2.45□□□□□ -2.02
RAE1P78406 RNU7-14P-201ENST00000459331 62 ntBASIC2.45□□□□□ -2.02
RAE1P78406 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.45□□□□□ -2.02
RAE1P78406 ATP5EP1-201ENST00000510257 156 ntBASIC2.45□□□□□ -2.02
RAE1P78406 RNU6-965P-201ENST00000516721 96 ntBASIC2.45□□□□□ -2.02
RAE1P78406 AC005000.2-201ENST00000605468 310 ntBASIC2.45□□□□□ -2.02
RAE1P78406 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.45□□□□□ -2.02
RAE1P78406 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.45□□□□□ -2.02
RAE1P78406 snoU2_19.2-201ENST00000363024 80 ntBASIC2.44□□□□□ -2.02
RAE1P78406 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
RAE1P78406 RNU6-1026P-201ENST00000384465 108 ntBASIC2.44□□□□□ -2.02
RAE1P78406 MT-TW-201ENST00000387382 68 ntBASIC2.44□□□□□ -2.02
RAE1P78406 MIR1283-1-201ENST00000408494 87 ntBASIC2.44□□□□□ -2.02
RAE1P78406 RNU2-20P-201ENST00000410425 191 ntBASIC2.44□□□□□ -2.02
RAE1P78406 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
RAE1P78406 AC096920.1-201ENST00000423991 241 ntBASIC2.44□□□□□ -2.02
RAE1P78406 AC104389.3-201ENST00000445629 235 ntBASIC2.44□□□□□ -2.02
RAE1P78406 SNORD109B-201ENST00000458961 67 ntBASIC2.44□□□□□ -2.02
RAE1P78406 SNORD109A-201ENST00000459128 67 ntBASIC2.44□□□□□ -2.02
RAE1P78406 HMGN2P9-201ENST00000476875 229 ntBASIC2.44□□□□□ -2.02
RAE1P78406 SRIP1-201ENST00000489235 288 ntBASIC2.44□□□□□ -2.02
RAE1P78406 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
RAE1P78406 RNU6-496P-201ENST00000516145 99 ntBASIC2.44□□□□□ -2.02
RAE1P78406 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.44□□□□□ -2.02
RAE1P78406 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.44□□□□□ -2.02
RAE1P78406 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.44□□□□□ -2.02
RAE1P78406 GTF3AP2-201ENST00000557014 266 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms