Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.01□□□□□ -2.41
VBP1P61758 FRG2DP-202ENST00000566967 323 ntBASIC0.01□□□□□ -2.41
VBP1P61758 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
VBP1P61758 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.01□□□□□ -2.41
VBP1P61758 U6.73-201ENST00000619194 103 ntBASIC0.01□□□□□ -2.41
VBP1P61758 RNU6-1287P-201ENST00000362914 107 ntBASIC0□□□□□ -2.41
VBP1P61758 RNU6-931P-201ENST00000363850 107 ntBASIC0□□□□□ -2.41
VBP1P61758 Y_RNA.338-201ENST00000365320 114 ntBASIC0□□□□□ -2.41
VBP1P61758 RNU6-1060P-201ENST00000384664 107 ntBASIC0□□□□□ -2.41
VBP1P61758 RNA5SP219-201ENST00000390940 113 ntBASIC0□□□□□ -2.41
VBP1P61758 MRPL42P2-201ENST00000403169 426 ntBASIC0□□□□□ -2.41
VBP1P61758 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0□□□□□ -2.41
VBP1P61758 MTCO2P34-201ENST00000421994 607 ntBASIC0□□□□□ -2.41
VBP1P61758 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0□□□□□ -2.41
VBP1P61758 TAF9P1-201ENST00000445421 515 ntBASIC0□□□□□ -2.41
VBP1P61758 RPS20P10-201ENST00000451209 253 ntBASIC0□□□□□ -2.41
VBP1P61758 TAF9P2-201ENST00000454958 515 ntBASIC0□□□□□ -2.41
VBP1P61758 RNU6-221P-201ENST00000459541 99 ntBASIC0□□□□□ -2.41
VBP1P61758 RPS29P1-201ENST00000465274 159 ntBASIC0□□□□□ -2.41
VBP1P61758 AP000870.1-201ENST00000472927 406 ntBASIC0□□□□□ -2.41
VBP1P61758 RNU7-99P-201ENST00000516271 62 ntBASIC0□□□□□ -2.41
VBP1P61758 AC105185.1-201ENST00000518705 535 ntBASIC0□□□□□ -2.41
VBP1P61758 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0□□□□□ -2.41
VBP1P61758 AL031667.3-201ENST00000620124 655 ntBASIC0□□□□□ -2.41
VBP1P61758 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.01□□□□□ -2.41
VBP1P61758 AC005592.1-201ENST00000566527 1640 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 RNU4-68P-201ENST00000364314 141 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 RNU6-169P-201ENST00000365336 107 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 SNORD114-22-201ENST00000365423 72 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 MIR1276-201ENST00000408707 83 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 MTCO2P21-201ENST00000419780 677 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 MTCO2P23-201ENST00000425216 680 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.01□□□□□ -2.41
VBP1P61758 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.01□□□□□ -2.41
VBP1P61758 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.01□□□□□ -2.41
VBP1P61758 MTCO2P7-201ENST00000446518 666 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 SNRPGP12-201ENST00000449481 213 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 AC010469.2-201ENST00000496412 480 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.01□□□□□ -2.41
VBP1P61758 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.01□□□□□ -2.41
VBP1P61758 AC026470.2-201ENST00000561492 181 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 AL136317.1-201ENST00000612653 226 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 MIR6715A-201ENST00000615929 79 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 AC068792.1-201ENST00000621354 417 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.01□□□□□ -2.41
VBP1P61758 AL390237.1-201ENST00000404226 1415 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 RNA5SP62-201ENST00000363457 110 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 MIR936-201ENST00000401264 98 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.02□□□□□ -2.41
VBP1P61758 AF235103.2-201ENST00000525753 346 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 MIR4452-201ENST00000583004 71 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 MIR4769-201ENST00000584126 77 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 uc_338.34-201ENST00000617467 174 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 AL078596.1-201ENST00000624856 447 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 AL359697.1-201ENST00000624879 587 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 AL138960.2-201ENST00000625145 535 ntBASIC-0.02□□□□□ -2.41
VBP1P61758 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 RNU6-137P-201ENST00000363680 108 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.03□□□□□ -2.41
VBP1P61758 MIR487A-201ENST00000385009 80 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.03□□□□□ -2.41
VBP1P61758 AC008134.1-201ENST00000420943 193 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 AC074290.1-201ENST00000448883 135 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 MTCO3P10-201ENST00000455912 772 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.03□□□□□ -2.41
VBP1P61758 AC067940.1-201ENST00000458411 300 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.03□□□□□ -2.41
VBP1P61758 MTND1P22-201ENST00000510572 951 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 RNU1-117P-201ENST00000517041 158 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 RNA5SP454-201ENST00000517231 127 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 MIR4300-201ENST00000581016 96 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 AC005771.1-201ENST00000585581 349 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 AL162730.1-201ENST00000605734 292 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 SNORA28-201ENST00000606769 126 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 AC007684.1-201ENST00000609671 477 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 U6.114-201ENST00000636407 96 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 MIR924-201ENST00000638017 53 ntBASIC-0.03□□□□□ -2.41
VBP1P61758 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.42
VBP1P61758 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
VBP1P61758 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
VBP1P61758 MIRLET7C-201ENST00000362160 84 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 RNU4-92P-201ENST00000363783 136 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 RNU1-133P-201ENST00000364867 167 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 SNORA20.2-201ENST00000383922 131 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 RNU6-157P-201ENST00000383957 107 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 RNU6-393P-201ENST00000384475 107 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 SNORD70.1-201ENST00000391007 85 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 CALM2P3-201ENST00000400429 449 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 RNU6-994P-201ENST00000410507 111 ntBASIC-0.04□□□□□ -2.42
VBP1P61758 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms