Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CDH6P55285 RNU6-1123P-201ENST00000362347 106 ntBASIC1.08□□□□□ -2.24
CDH6P55285 RNU6-1305P-201ENST00000364353 104 ntBASIC1.08□□□□□ -2.24
CDH6P55285 Y_RNA.338-201ENST00000365320 114 ntBASIC1.08□□□□□ -2.24
CDH6P55285 RNU6-321P-201ENST00000410912 106 ntBASIC1.08□□□□□ -2.24
CDH6P55285 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.08□□□□□ -2.24
CDH6P55285 TPT1P7-201ENST00000458300 517 ntBASIC1.08□□□□□ -2.24
CDH6P55285 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
CDH6P55285 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.08□□□□□ -2.24
CDH6P55285 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.08□□□□□ -2.24
CDH6P55285 AC091133.4-201ENST00000511142 308 ntBASIC1.08□□□□□ -2.24
CDH6P55285 AC092436.3-201ENST00000511788 257 ntBASIC1.08□□□□□ -2.24
CDH6P55285 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
CDH6P55285 AC024995.1-201ENST00000523014 93 ntBASIC1.08□□□□□ -2.24
CDH6P55285 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.08□□□□□ -2.24
CDH6P55285 AC146944.4-201ENST00000602697 718 ntBASIC1.08□□□□□ -2.24
CDH6P55285 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
CDH6P55285 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
CDH6P55285 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
CDH6P55285 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
CDH6P55285 AC090582.1-201ENST00000636321 199 ntBASIC1.08□□□□□ -2.24
CDH6P55285 MTND4P5-201ENST00000435821 1374 ntBASIC1.08□□□□□ -2.24
CDH6P55285 RNA5SP259-201ENST00000365541 109 ntBASIC1.07□□□□□ -2.24
CDH6P55285 SNORA69-201ENST00000383895 132 ntBASIC1.07□□□□□ -2.24
CDH6P55285 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
CDH6P55285 RNU6-950P-201ENST00000384651 107 ntBASIC1.07□□□□□ -2.24
CDH6P55285 RNU6-417P-201ENST00000384712 107 ntBASIC1.07□□□□□ -2.24
CDH6P55285 MIR487A-201ENST00000385009 80 ntBASIC1.07□□□□□ -2.24
CDH6P55285 MIR586-201ENST00000385035 97 ntBASIC1.07□□□□□ -2.24
CDH6P55285 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDH6P55285 Y_RNA.582-201ENST00000391023 95 ntBASIC1.07□□□□□ -2.24
CDH6P55285 MIR450B-201ENST00000401182 78 ntBASIC1.07□□□□□ -2.24
CDH6P55285 RNU6-57P-201ENST00000411348 103 ntBASIC1.07□□□□□ -2.24
CDH6P55285 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
CDH6P55285 RNU6-1208P-201ENST00000459588 107 ntBASIC1.07□□□□□ -2.24
CDH6P55285 AC007215.1-201ENST00000464893 276 ntBASIC1.07□□□□□ -2.24
CDH6P55285 AC005840.1-201ENST00000498412 377 ntBASIC1.07□□□□□ -2.24
CDH6P55285 TRMT112P2-201ENST00000512910 132 ntBASIC1.07□□□□□ -2.24
CDH6P55285 RNU6-1332P-201ENST00000516666 104 ntBASIC1.07□□□□□ -2.24
CDH6P55285 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CDH6P55285 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.07□□□□□ -2.24
CDH6P55285 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH6P55285 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH6P55285 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.07□□□□□ -2.24
CDH6P55285 FGF7P1-201ENST00000582820 288 ntBASIC1.07□□□□□ -2.24
CDH6P55285 SNRPGP20-201ENST00000604477 205 ntBASIC1.07□□□□□ -2.24
CDH6P55285 AP001330.5-201ENST00000607176 411 ntBASIC1.07□□□□□ -2.24
CDH6P55285 AC009509.4-201ENST00000619202 509 ntBASIC1.07□□□□□ -2.24
CDH6P55285 MIR3974-201ENST00000637126 96 ntBASIC1.07□□□□□ -2.24
CDH6P55285 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CDH6P55285 RNU6-214P-201ENST00000384130 107 ntBASIC1.06□□□□□ -2.24
CDH6P55285 RNU6-933P-201ENST00000384424 107 ntBASIC1.06□□□□□ -2.24
CDH6P55285 MIR1253-201ENST00000408273 105 ntBASIC1.06□□□□□ -2.24
CDH6P55285 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH6P55285 MTCO2P16-201ENST00000436962 677 ntBASIC1.06□□□□□ -2.24
CDH6P55285 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH6P55285 RNU6-261P-201ENST00000459506 102 ntBASIC1.06□□□□□ -2.24
CDH6P55285 AC083798.1-201ENST00000472671 131 ntBASIC1.06□□□□□ -2.24
CDH6P55285 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.06□□□□□ -2.24
CDH6P55285 AC104383.1-201ENST00000530297 370 ntBASIC1.06□□□□□ -2.24
CDH6P55285 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.06□□□□□ -2.24
CDH6P55285 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
CDH6P55285 MIR4742-201ENST00000581069 85 ntBASIC1.06□□□□□ -2.24
CDH6P55285 AC080078.3-201ENST00000605407 463 ntBASIC1.06□□□□□ -2.24
CDH6P55285 AC097065.2-201ENST00000608159 533 ntBASIC1.06□□□□□ -2.24
CDH6P55285 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.06□□□□□ -2.24
CDH6P55285 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH6P55285 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.06□□□□□ -2.24
CDH6P55285 SCARNA4-201ENST00000629045 128 ntBASIC1.06□□□□□ -2.24
CDH6P55285 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CDH6P55285 Y_RNA.77-201ENST00000362962 107 ntBASIC1.05□□□□□ -2.24
CDH6P55285 RNA5SP323-201ENST00000391094 133 ntBASIC1.05□□□□□ -2.24
CDH6P55285 MIR320B2-201ENST00000408479 138 ntBASIC1.05□□□□□ -2.24
CDH6P55285 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH6P55285 MTND3P16-201ENST00000452205 344 ntBASIC1.05□□□□□ -2.24
CDH6P55285 RNU7-57P-201ENST00000459540 60 ntBASIC1.05□□□□□ -2.24
CDH6P55285 MTCO1P29-201ENST00000496868 288 ntBASIC1.05□□□□□ -2.24
CDH6P55285 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
CDH6P55285 RNU1-117P-201ENST00000517041 158 ntBASIC1.05□□□□□ -2.24
CDH6P55285 MTND1P35-201ENST00000526739 508 ntBASIC1.05□□□□□ -2.24
CDH6P55285 AC017083.3-201ENST00000609955 700 ntBASIC1.05□□□□□ -2.24
CDH6P55285 MIR8076-201ENST00000611401 83 ntBASIC1.05□□□□□ -2.24
CDH6P55285 AC068792.1-201ENST00000621354 417 ntBASIC1.05□□□□□ -2.24
CDH6P55285 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH6P55285 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH6P55285 ZNF204P-201ENST00000416749 2397 ntBASIC1.04□□□□□ -2.24
CDH6P55285 RNY1P10-201ENST00000363268 113 ntBASIC1.04□□□□□ -2.24
CDH6P55285 RNU6-1322P-201ENST00000364309 107 ntBASIC1.04□□□□□ -2.24
CDH6P55285 Y_RNA.287-201ENST00000364853 94 ntBASIC1.04□□□□□ -2.24
CDH6P55285 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
CDH6P55285 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
CDH6P55285 RNA5SP467-201ENST00000391274 118 ntBASIC1.04□□□□□ -2.24
CDH6P55285 EIF4E2P1-201ENST00000393781 255 ntBASIC1.04□□□□□ -2.24
CDH6P55285 DEFB108C-201ENST00000400154 252 ntBASIC1.04□□□□□ -2.24
CDH6P55285 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH6P55285 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH6P55285 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.04□□□□□ -2.24
CDH6P55285 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH6P55285 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
CDH6P55285 BNIP3P10-201ENST00000605360 577 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms