Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
NCKAP1LP55160 AL135790.2-201ENST00000437701 267 ntBASIC3.34□□□□□ -1.87
NCKAP1LP55160 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.34□□□□□ -1.87
NCKAP1LP55160 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.34□□□□□ -1.87
NCKAP1LP55160 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.34□□□□□ -1.87
NCKAP1LP55160 U8.19-201ENST00000459095 133 ntBASIC3.34□□□□□ -1.87
NCKAP1LP55160 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
NCKAP1LP55160 AC136628.3-201ENST00000521868 290 ntBASIC3.34□□□□□ -1.87
NCKAP1LP55160 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.34□□□□□ -1.87
NCKAP1LP55160 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.34□□□□□ -1.87
NCKAP1LP55160 MIR4431-201ENST00000579990 94 ntBASIC3.34□□□□□ -1.87
NCKAP1LP55160 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.34□□□□□ -1.88
NCKAP1LP55160 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
NCKAP1LP55160 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NCKAP1LP55160 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKAP1LP55160 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NCKAP1LP55160 AC010332.2-201ENST00000613083 1904 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 AC000403.1-201ENST00000613696 3585 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 MIR422A-201ENST00000362286 90 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 RNU6-151P-201ENST00000364158 107 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 RNU6-215P-201ENST00000365169 102 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 SNORA46-201ENST00000384762 135 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 MIR549A-201ENST00000385268 96 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 RNA5SP475-201ENST00000410568 110 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 CR769767.1-201ENST00000436337 346 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 AIG1P1-201ENST00000503376 148 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 RN7SKP164-201ENST00000516138 266 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.33□□□□□ -1.88
NCKAP1LP55160 MIR3200-201ENST00000580767 85 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 SNRPGP20-201ENST00000604477 205 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 AL110115.1-201ENST00000614396 364 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 SNORD98-201ENST00000636377 67 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NCKAP1LP55160 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NCKAP1LP55160 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKAP1LP55160 AC068700.1-201ENST00000565862 3754 ntBASIC3.33□□□□□ -1.88
NCKAP1LP55160 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKAP1LP55160 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKAP1LP55160 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NCKAP1LP55160 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
NCKAP1LP55160 AC100821.1-201ENST00000523153 2479 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 FAM35BP-202ENST00000497389 3337 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 RNU6-103P-201ENST00000363686 107 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 Y_RNA.273-201ENST00000364703 102 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NCKAP1LP55160 MIR320B2-201ENST00000408479 138 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 RNA5SP201-201ENST00000410316 124 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 AC099548.1-201ENST00000421443 426 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.32□□□□□ -1.88
NCKAP1LP55160 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKAP1LP55160 RNU5F-2P-201ENST00000516066 82 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 RNA5SP341-201ENST00000516261 117 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKAP1LP55160 AC006380.1-201ENST00000603598 186 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.32□□□□□ -1.88
NCKAP1LP55160 AP003122.5-201ENST00000527668 3766 ntBASIC3.32□□□□□ -1.88
NCKAP1LP55160 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCKAP1LP55160 RNU6-50P-201ENST00000362356 103 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 Y_RNA.353-201ENST00000365440 108 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 Y_RNA.361-201ENST00000365515 120 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 MIR626-201ENST00000385032 94 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 SNORA40-201ENST00000388090 126 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 RNU6-578P-201ENST00000390980 103 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 Y_RNA.797-201ENST00000515977 94 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 RNU6-344P-201ENST00000516635 111 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 AC245166.1-201ENST00000521012 253 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 MIR4744-201ENST00000581563 82 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 AC090616.3-201ENST00000582184 217 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 AC013791.1-201ENST00000616619 62 ntBASIC3.31□□□□□ -1.88
NCKAP1LP55160 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCKAP1LP55160 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
NCKAP1LP55160 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NCKAP1LP55160 AC134026.1-201ENST00000623249 2239 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 RNU6-727P-201ENST00000363592 107 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 RNU6-899P-201ENST00000363947 107 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 SNORD115-30-201ENST00000364117 82 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 snoU2_19.4-201ENST00000364329 80 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 SNORD20-201ENST00000384550 80 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 SNORA26.5-201ENST00000391215 123 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 MIR208B-201ENST00000401172 77 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 CBX3P9-201ENST00000402326 552 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCKAP1LP55160 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.3□□□□□ -1.88
NCKAP1LP55160 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.3□□□□□ -1.88
NCKAP1LP55160 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 snoU13.14-201ENST00000459372 104 ntBASIC3.3□□□□□ -1.88
NCKAP1LP55160 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms