Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CACNA2D1P54289 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC092268.1-201ENST00000342691 405 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU1-105P-201ENST00000363470 161 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU6-1285P-201ENST00000363480 105 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU6-682P-201ENST00000363843 106 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 Y_RNA.275-201ENST00000364726 110 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 MIR9-1-201ENST00000385198 89 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 Y_RNA.590-201ENST00000410140 107 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC012306.1-201ENST00000423267 114 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC019205.3-201ENST00000424573 156 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC063976.3-201ENST00000426849 329 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU7-23P-201ENST00000459465 62 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC091959.1-201ENST00000495857 238 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.84□□□□□ -1.95
CACNA2D1P54289 Y_RNA.679-201ENST00000516416 91 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU6-966P-201ENST00000516479 104 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU6-861P-201ENST00000516745 106 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 RNU6-1198P-201ENST00000516904 67 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.84□□□□□ -1.95
CACNA2D1P54289 MIR3162-201ENST00000581818 82 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 MIR3133-201ENST00000583157 78 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC011921.3-201ENST00000605540 361 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC006001.4-201ENST00000622243 395 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 MIR3199-2-201ENST00000636243 86 ntBASIC2.84□□□□□ -1.95
CACNA2D1P54289 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.84□□□□□ -1.95
CACNA2D1P54289 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.84□□□□□ -1.95
CACNA2D1P54289 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.84□□□□□ -1.96
CACNA2D1P54289 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 SNORA25.6-201ENST00000364121 118 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 Y_RNA.331-201ENST00000365267 102 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 Y_RNA.383-201ENST00000383855 97 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 RNU6-746P-201ENST00000384112 109 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 Y_RNA.464-201ENST00000384282 110 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 SNORA19-201ENST00000384737 128 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 AL139095.1-201ENST00000404326 391 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 AL133475.1-201ENST00000404414 305 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 RPL19P1-201ENST00000411635 428 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 MTCO1P5-201ENST00000433573 344 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 AL161651.1-201ENST00000440882 223 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 AC009237.7-201ENST00000447357 229 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 RNU6-789P-201ENST00000517105 102 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 AC005176.2-201ENST00000596933 147 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 AL356575.1-201ENST00000603008 283 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 MZT1P2-201ENST00000604387 248 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 AC010999.1-201ENST00000611856 324 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 ZNF204P-201ENST00000416749 2397 ntBASIC2.83□□□□□ -1.96
CACNA2D1P54289 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.83□□□□□ -1.96
CACNA2D1P54289 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 MIR410-201ENST00000362222 80 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 RNU6-859P-201ENST00000362728 107 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 RNU6-514P-201ENST00000384208 107 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 SNORA26.3-201ENST00000391119 136 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 RNA5SP390-201ENST00000410191 113 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 Y_RNA.595-201ENST00000410403 105 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 RNU2-61P-201ENST00000411069 191 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 AC023141.4-201ENST00000412031 328 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 POLR2KP2-201ENST00000438155 177 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 RPS27P26-201ENST00000494583 239 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 Y_RNA.683-201ENST00000516508 93 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
CACNA2D1P54289 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CACNA2D1P54289 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.82□□□□□ -1.96
CACNA2D1P54289 Y_RNA.230-201ENST00000364348 109 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 RNU6-662P-201ENST00000384253 104 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 RNU6-378P-201ENST00000384324 107 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 RNU6-1289P-201ENST00000384431 106 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 RN7SKP51-201ENST00000410781 304 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.81□□□□□ -1.96
CACNA2D1P54289 AL392103.1-201ENST00000447000 198 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA2D1P54289 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.81□□□□□ -1.96
CACNA2D1P54289 RNY3P16-201ENST00000516338 101 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 SNORA27.4-201ENST00000516650 95 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 RNA5SP54-201ENST00000516951 92 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA2D1P54289 Z83818.1-201ENST00000603584 150 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 AC002064.3-201ENST00000623448 346 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 MTND5P35-201ENST00000557537 1720 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 AL136360.1-201ENST00000503377 1900 ntBASIC2.81□□□□□ -1.96
CACNA2D1P54289 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA2D1P54289 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CACNA2D1P54289 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms