Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.37□□□□□ -1.87
PMS1P54277 MIR5680-201ENST00000577577 84 ntBASIC3.37□□□□□ -1.87
PMS1P54277 AC010620.2-201ENST00000600135 313 ntBASIC3.37□□□□□ -1.87
PMS1P54277 AL365265.1-201ENST00000621045 234 ntBASIC3.37□□□□□ -1.87
PMS1P54277 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.37□□□□□ -1.87
PMS1P54277 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PMS1P54277 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.36□□□□□ -1.87
PMS1P54277 SNORD115-30-201ENST00000364117 82 ntBASIC3.36□□□□□ -1.87
PMS1P54277 Y_RNA.233-201ENST00000364407 101 ntBASIC3.36□□□□□ -1.87
PMS1P54277 SNORA40.19-201ENST00000390846 128 ntBASIC3.36□□□□□ -1.87
PMS1P54277 AL031003.1-201ENST00000404229 172 ntBASIC3.36□□□□□ -1.87
PMS1P54277 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.36□□□□□ -1.87
PMS1P54277 RNA5SP120-201ENST00000410900 112 ntBASIC3.36□□□□□ -1.87
PMS1P54277 RN7SL504P-201ENST00000494496 287 ntBASIC3.36□□□□□ -1.87
PMS1P54277 Y_RNA.662-201ENST00000516028 97 ntBASIC3.36□□□□□ -1.87
PMS1P54277 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PMS1P54277 AL008718.3-201ENST00000610217 321 ntBASIC3.36□□□□□ -1.87
PMS1P54277 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PMS1P54277 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PMS1P54277 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PMS1P54277 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PMS1P54277 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.35□□□□□ -1.87
PMS1P54277 RNU6-774P-201ENST00000363238 107 ntBASIC3.35□□□□□ -1.87
PMS1P54277 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PMS1P54277 MIR586-201ENST00000385035 97 ntBASIC3.35□□□□□ -1.87
PMS1P54277 MIR548B-201ENST00000385247 97 ntBASIC3.35□□□□□ -1.87
PMS1P54277 MIR1294-201ENST00000408503 142 ntBASIC3.35□□□□□ -1.87
PMS1P54277 MIR1289-1-201ENST00000408836 144 ntBASIC3.35□□□□□ -1.87
PMS1P54277 OOSP1P1-201ENST00000423265 274 ntBASIC3.35□□□□□ -1.87
PMS1P54277 RPL23AP58-201ENST00000440453 469 ntBASIC3.35□□□□□ -1.87
PMS1P54277 AC074198.2-201ENST00000508153 258 ntBASIC3.35□□□□□ -1.87
PMS1P54277 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.35□□□□□ -1.87
PMS1P54277 PHBP14-201ENST00000512887 367 ntBASIC3.35□□□□□ -1.87
PMS1P54277 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.35□□□□□ -1.87
PMS1P54277 AC008739.3-201ENST00000603262 127 ntBASIC3.35□□□□□ -1.87
PMS1P54277 AC004832.5-201ENST00000608677 401 ntBASIC3.35□□□□□ -1.87
PMS1P54277 AC107294.3-201ENST00000609211 526 ntBASIC3.35□□□□□ -1.87
PMS1P54277 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PMS1P54277 AC093908.1-201ENST00000623125 8092 ntBASIC3.34□□□□□ -1.87
PMS1P54277 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.34□□□□□ -1.87
PMS1P54277 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PMS1P54277 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.34□□□□□ -1.87
PMS1P54277 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.34□□□□□ -1.87
PMS1P54277 RNU6-746P-201ENST00000384112 109 ntBASIC3.34□□□□□ -1.87
PMS1P54277 SNORD15B-201ENST00000384714 146 ntBASIC3.34□□□□□ -1.87
PMS1P54277 MIR670-201ENST00000390142 98 ntBASIC3.34□□□□□ -1.87
PMS1P54277 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
PMS1P54277 MIR449C-201ENST00000516047 92 ntBASIC3.34□□□□□ -1.87
PMS1P54277 RNU6-255P-201ENST00000516957 105 ntBASIC3.34□□□□□ -1.87
PMS1P54277 MIR4308-201ENST00000580634 81 ntBASIC3.34□□□□□ -1.87
PMS1P54277 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.34□□□□□ -1.87
PMS1P54277 AC019176.2-201ENST00000611579 315 ntBASIC3.34□□□□□ -1.87
PMS1P54277 AC012314.7-201ENST00000619693 93 ntBASIC3.34□□□□□ -1.87
PMS1P54277 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PMS1P54277 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.34□□□□□ -1.87
PMS1P54277 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PMS1P54277 Y_RNA.243-201ENST00000364481 109 ntBASIC3.33□□□□□ -1.88
PMS1P54277 RNU6-1274P-201ENST00000384557 107 ntBASIC3.33□□□□□ -1.88
PMS1P54277 RNU6-710P-201ENST00000410424 105 ntBASIC3.33□□□□□ -1.88
PMS1P54277 AL139281.1-201ENST00000422120 335 ntBASIC3.33□□□□□ -1.88
PMS1P54277 RNU7-14P-201ENST00000459331 62 ntBASIC3.33□□□□□ -1.88
PMS1P54277 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.33□□□□□ -1.88
PMS1P54277 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PMS1P54277 RN7SKP43-201ENST00000516173 320 ntBASIC3.33□□□□□ -1.88
PMS1P54277 RNU6-1212P-201ENST00000517023 104 ntBASIC3.33□□□□□ -1.88
PMS1P54277 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.33□□□□□ -1.88
PMS1P54277 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.33□□□□□ -1.88
PMS1P54277 MIR5692C2-201ENST00000577959 77 ntBASIC3.33□□□□□ -1.88
PMS1P54277 MIR6798-201ENST00000612887 67 ntBASIC3.33□□□□□ -1.88
PMS1P54277 U6.106-201ENST00000636360 105 ntBASIC3.33□□□□□ -1.88
PMS1P54277 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
PMS1P54277 AC092435.3-201ENST00000565538 3654 ntBASIC3.33□□□□□ -1.88
PMS1P54277 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PMS1P54277 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PMS1P54277 AP003122.5-201ENST00000527668 3766 ntBASIC3.32□□□□□ -1.88
PMS1P54277 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.32□□□□□ -1.88
PMS1P54277 SNORA51.4-201ENST00000364993 124 ntBASIC3.32□□□□□ -1.88
PMS1P54277 RNU6-763P-201ENST00000390865 106 ntBASIC3.32□□□□□ -1.88
PMS1P54277 AL357139.1-201ENST00000407792 426 ntBASIC3.32□□□□□ -1.88
PMS1P54277 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.32□□□□□ -1.88
PMS1P54277 RN7SKP51-201ENST00000410781 304 ntBASIC3.32□□□□□ -1.88
PMS1P54277 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.32□□□□□ -1.88
PMS1P54277 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PMS1P54277 AC083906.5-201ENST00000503722 328 ntBASIC3.32□□□□□ -1.88
PMS1P54277 HMGB3P3-201ENST00000510526 400 ntBASIC3.32□□□□□ -1.88
PMS1P54277 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.32□□□□□ -1.88
PMS1P54277 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.32□□□□□ -1.88
PMS1P54277 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.32□□□□□ -1.88
PMS1P54277 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.32□□□□□ -1.88
PMS1P54277 U6.115-201ENST00000636045 103 ntBASIC3.32□□□□□ -1.88
PMS1P54277 MIR7515-201ENST00000637837 67 ntBASIC3.32□□□□□ -1.88
PMS1P54277 RNU6-653P-201ENST00000363074 106 ntBASIC3.31□□□□□ -1.88
PMS1P54277 Y_RNA.240-201ENST00000364469 95 ntBASIC3.31□□□□□ -1.88
PMS1P54277 Y_RNA.435-201ENST00000384095 112 ntBASIC3.31□□□□□ -1.88
PMS1P54277 RNA5SP171-201ENST00000391071 115 ntBASIC3.31□□□□□ -1.88
PMS1P54277 MIR300-201ENST00000401138 83 ntBASIC3.31□□□□□ -1.88
PMS1P54277 AC074290.1-201ENST00000448883 135 ntBASIC3.31□□□□□ -1.88
PMS1P54277 Y_RNA.637-201ENST00000459424 114 ntBASIC3.31□□□□□ -1.88
PMS1P54277 HMGN2P9-201ENST00000476875 229 ntBASIC3.31□□□□□ -1.88
PMS1P54277 RPS29P2-201ENST00000479278 136 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms