Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 USP9YP29-201ENST00000445112 563 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.18□□□□□ -2.44
POLR2JP52435 RNU7-57P-201ENST00000459540 60 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 AC117522.1-201ENST00000509821 380 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 RNA5SP227-201ENST00000516184 113 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 RNA5SP337-201ENST00000517007 109 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 RNU6-685P-201ENST00000517088 95 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.18□□□□□ -2.44
POLR2JP52435 AL162730.1-201ENST00000605734 292 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 uc_338.34-201ENST00000617467 174 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 AC015726.2-201ENST00000620112 122 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 OR5AK4P-201ENST00000635912 903 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 MIR371B-201ENST00000638082 66 ntBASIC-0.18□□□□□ -2.44
POLR2JP52435 AC099786.3-201ENST00000565735 1410 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 SNORA25.3-201ENST00000363205 127 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 MIR526A1-201ENST00000384897 85 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 SNORD111-201ENST00000408139 94 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 RNU6-994P-201ENST00000410507 111 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 AL117339.3-201ENST00000418733 162 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 AC004854.1-201ENST00000440356 349 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.19□□□□□ -2.44
POLR2JP52435 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.19□□□□□ -2.44
POLR2JP52435 AC116353.3-201ENST00000511215 249 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.19□□□□□ -2.44
POLR2JP52435 MIR5006-201ENST00000583027 110 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 7SK.7-201ENST00000603504 247 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 SNORA28-201ENST00000606769 126 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 AL359697.1-201ENST00000624879 587 ntBASIC-0.19□□□□□ -2.44
POLR2JP52435 RNA5SP517-201ENST00000364724 117 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 RNU6-413P-201ENST00000384115 107 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 MIR586-201ENST00000385035 97 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 AC007327.1-201ENST00000447461 264 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.2□□□□□ -2.44
POLR2JP52435 RN7SKP164-201ENST00000516138 266 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 SNORA25.12-201ENST00000516202 82 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 AC022616.6-201ENST00000520479 119 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 RN7SL793P-201ENST00000583259 296 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 AP001836.1-201ENST00000604675 523 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 AC121334.2-201ENST00000605387 271 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.2□□□□□ -2.44
POLR2JP52435 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.2□□□□□ -2.44
POLR2JP52435 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 SNORA40.8-201ENST00000411034 126 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 snoU13.6-201ENST00000458785 104 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 snoU13.18-201ENST00000459483 104 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 RNU7-12P-201ENST00000516030 62 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 RNU7-99P-201ENST00000516271 62 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.21□□□□□ -2.44
POLR2JP52435 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.21□□□□□ -2.44
POLR2JP52435 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
POLR2JP52435 MIR4300-201ENST00000581016 96 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 AC104408.1-201ENST00000605241 170 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.21□□□□□ -2.44
POLR2JP52435 AC007684.1-201ENST00000609671 477 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 U6.73-201ENST00000619194 103 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 AL121895.2-201ENST00000619558 447 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 snoZ196.1-201ENST00000625269 89 ntBASIC-0.21□□□□□ -2.44
POLR2JP52435 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.21□□□□□ -2.44
POLR2JP52435 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
POLR2JP52435 RNU4-1-201ENST00000363925 141 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 RNY1-201ENST00000364228 113 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 SNORA67.2-201ENST00000384300 149 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 ERHP2-201ENST00000402323 299 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 AL136310.1-201ENST00000404926 654 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 AC009237.7-201ENST00000447357 229 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 RNU6-221P-201ENST00000459541 99 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.22□□□□□ -2.44
POLR2JP52435 AC074133.1-201ENST00000515696 183 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.22□□□□□ -2.44
POLR2JP52435 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 MIR5190-201ENST00000581537 80 ntBASIC-0.22□□□□□ -2.44
POLR2JP52435 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
POLR2JP52435 MIRLET7C-201ENST00000362160 84 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 MIR330-201ENST00000362196 94 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 RNU6-369P-201ENST00000362515 102 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 RNA5SP63-201ENST00000391225 112 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 MTCYBP36-201ENST00000404146 440 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 RNU2-39P-201ENST00000410604 198 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 SNORD83.1-201ENST00000411362 77 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 AC008134.1-201ENST00000420943 193 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.23□□□□□ -2.45
POLR2JP52435 MED13P1-201ENST00000428342 171 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.23□□□□□ -2.45
POLR2JP52435 MTCO3P8-201ENST00000453691 755 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 RNU7-94P-201ENST00000459576 63 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 AC104136.1-201ENST00000512969 394 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 AC103996.1-201ENST00000555468 102 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.23□□□□□ -2.45
POLR2JP52435 AC019226.2-201ENST00000625973 424 ntBASIC-0.23□□□□□ -2.45
POLR2JP52435 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.24□□□□□ -2.45
POLR2JP52435 AL589826.1-201ENST00000340697 249 ntBASIC-0.24□□□□□ -2.45
POLR2JP52435 MIR1-1-201ENST00000362147 71 ntBASIC-0.24□□□□□ -2.45
POLR2JP52435 SNORD114-5-201ENST00000362928 70 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms