Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-1298P-201ENST00000362456 101 ntBASIC3.74□□□□□ -1.81
USP11P51784 RNU1-70P-201ENST00000362618 164 ntBASIC3.74□□□□□ -1.81
USP11P51784 Y_RNA.40-201ENST00000362645 93 ntBASIC3.74□□□□□ -1.81
USP11P51784 MT-TT-201ENST00000387460 66 ntBASIC3.74□□□□□ -1.81
USP11P51784 RNU6-460P-201ENST00000391158 108 ntBASIC3.74□□□□□ -1.81
USP11P51784 RNA5SP201-201ENST00000410316 124 ntBASIC3.74□□□□□ -1.81
USP11P51784 CYCSP48-201ENST00000417124 323 ntBASIC3.74□□□□□ -1.81
USP11P51784 PTGES3P4-201ENST00000426243 356 ntBASIC3.74□□□□□ -1.81
USP11P51784 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.74□□□□□ -1.81
USP11P51784 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.74□□□□□ -1.81
USP11P51784 RN7SL807P-201ENST00000470923 297 ntBASIC3.74□□□□□ -1.81
USP11P51784 AP002884.2-201ENST00000471647 395 ntBASIC3.74□□□□□ -1.81
USP11P51784 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.74□□□□□ -1.81
USP11P51784 RNU6-1007P-201ENST00000516586 107 ntBASIC3.74□□□□□ -1.81
USP11P51784 HIGD1AP1-201ENST00000550979 275 ntBASIC3.74□□□□□ -1.81
USP11P51784 AL162713.1-201ENST00000604480 262 ntBASIC3.74□□□□□ -1.81
USP11P51784 PCGEM1.1-201ENST00000613431 131 ntBASIC3.74□□□□□ -1.81
USP11P51784 Y_RNA.802-201ENST00000614892 130 ntBASIC3.74□□□□□ -1.81
USP11P51784 TUG1_4.1-201ENST00000619464 181 ntBASIC3.74□□□□□ -1.81
USP11P51784 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP11P51784 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP11P51784 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP11P51784 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USP11P51784 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.73□□□□□ -1.81
USP11P51784 AC007496.3-201ENST00000624987 3443 ntBASIC3.73□□□□□ -1.81
USP11P51784 RNU6-834P-201ENST00000362367 110 ntBASIC3.73□□□□□ -1.81
USP11P51784 Y_RNA.310-201ENST00000365063 113 ntBASIC3.73□□□□□ -1.81
USP11P51784 RNU6-407P-201ENST00000365280 104 ntBASIC3.73□□□□□ -1.81
USP11P51784 Y_RNA.368-201ENST00000365547 113 ntBASIC3.73□□□□□ -1.81
USP11P51784 Y_RNA.525-201ENST00000384570 113 ntBASIC3.73□□□□□ -1.81
USP11P51784 RNU6-429P-201ENST00000384582 108 ntBASIC3.73□□□□□ -1.81
USP11P51784 Y_RNA.563-201ENST00000384707 108 ntBASIC3.73□□□□□ -1.81
USP11P51784 AL133475.1-201ENST00000404414 305 ntBASIC3.73□□□□□ -1.81
USP11P51784 HMGN2P20-201ENST00000437531 273 ntBASIC3.73□□□□□ -1.81
USP11P51784 RPL23AP70-201ENST00000483361 460 ntBASIC3.73□□□□□ -1.81
USP11P51784 AC006445.2-201ENST00000510061 472 ntBASIC3.73□□□□□ -1.81
USP11P51784 AC002076.2-201ENST00000617362 122 ntBASIC3.73□□□□□ -1.81
USP11P51784 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP11P51784 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP11P51784 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP11P51784 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.72□□□□□ -1.81
USP11P51784 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.72□□□□□ -1.81
USP11P51784 SNORA63.4-201ENST00000362763 126 ntBASIC3.72□□□□□ -1.81
USP11P51784 MIR320B2-201ENST00000408479 138 ntBASIC3.72□□□□□ -1.81
USP11P51784 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.72□□□□□ -1.81
USP11P51784 Z75741.1-201ENST00000446793 314 ntBASIC3.72□□□□□ -1.81
USP11P51784 AL121914.1-201ENST00000450188 156 ntBASIC3.72□□□□□ -1.81
USP11P51784 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.72□□□□□ -1.81
USP11P51784 HMGN2P15-201ENST00000585707 270 ntBASIC3.72□□□□□ -1.81
USP11P51784 AL034555.1-201ENST00000604816 211 ntBASIC3.72□□□□□ -1.81
USP11P51784 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.72□□□□□ -1.81
USP11P51784 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
USP11P51784 RNU1-75P-201ENST00000347264 129 ntBASIC3.71□□□□□ -1.82
USP11P51784 Y_RNA.361-201ENST00000365515 120 ntBASIC3.71□□□□□ -1.82
USP11P51784 MIR526A2-201ENST00000390198 65 ntBASIC3.71□□□□□ -1.82
USP11P51784 RNA5SP229-201ENST00000410809 99 ntBASIC3.71□□□□□ -1.82
USP11P51784 RNU4-47P-201ENST00000410876 114 ntBASIC3.71□□□□□ -1.82
USP11P51784 AC027124.2-201ENST00000428249 105 ntBASIC3.71□□□□□ -1.82
USP11P51784 AL161651.1-201ENST00000440882 223 ntBASIC3.71□□□□□ -1.82
USP11P51784 AC004386.2-201ENST00000441858 148 ntBASIC3.71□□□□□ -1.82
USP11P51784 RNU7-107P-201ENST00000459121 61 ntBASIC3.71□□□□□ -1.82
USP11P51784 RNU7-141P-201ENST00000459304 62 ntBASIC3.71□□□□□ -1.82
USP11P51784 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.71□□□□□ -1.82
USP11P51784 RPL30P14-201ENST00000482744 348 ntBASIC3.71□□□□□ -1.82
USP11P51784 YWHAEP4-201ENST00000505390 198 ntBASIC3.71□□□□□ -1.82
USP11P51784 PDCD5P2-201ENST00000507570 312 ntBASIC3.71□□□□□ -1.82
USP11P51784 RNU6-344P-201ENST00000516635 111 ntBASIC3.71□□□□□ -1.82
USP11P51784 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.71□□□□□ -1.82
USP11P51784 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.71□□□□□ -1.82
USP11P51784 AC011603.4-201ENST00000611325 277 ntBASIC3.71□□□□□ -1.82
USP11P51784 AC073308.1-201ENST00000623696 305 ntBASIC3.71□□□□□ -1.82
USP11P51784 AC068205.3-201ENST00000636385 468 ntBASIC3.71□□□□□ -1.82
USP11P51784 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP11P51784 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
USP11P51784 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP11P51784 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP11P51784 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP11P51784 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.7□□□□□ -1.82
USP11P51784 RNU4-15P-201ENST00000362613 141 ntBASIC3.7□□□□□ -1.82
USP11P51784 SNORA67.2-201ENST00000384300 149 ntBASIC3.7□□□□□ -1.82
USP11P51784 RNU6-768P-201ENST00000384683 107 ntBASIC3.7□□□□□ -1.82
USP11P51784 MIR15B-201ENST00000385045 98 ntBASIC3.7□□□□□ -1.82
USP11P51784 SNORD37.2-201ENST00000391075 66 ntBASIC3.7□□□□□ -1.82
USP11P51784 RNY4P18-201ENST00000391107 89 ntBASIC3.7□□□□□ -1.82
USP11P51784 RNU6-855P-201ENST00000410395 104 ntBASIC3.7□□□□□ -1.82
USP11P51784 AC023141.4-201ENST00000412031 328 ntBASIC3.7□□□□□ -1.82
USP11P51784 AC091179.1-201ENST00000461606 579 ntBASIC3.7□□□□□ -1.82
USP11P51784 AC092185.1-201ENST00000491371 97 ntBASIC3.7□□□□□ -1.82
USP11P51784 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.7□□□□□ -1.82
USP11P51784 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.7□□□□□ -1.82
USP11P51784 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.7□□□□□ -1.82
USP11P51784 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.7□□□□□ -1.82
USP11P51784 AL391903.3-201ENST00000612158 163 ntBASIC3.7□□□□□ -1.82
USP11P51784 MIR7112-201ENST00000616126 65 ntBASIC3.7□□□□□ -1.82
USP11P51784 AC073476.4-201ENST00000628409 72 ntBASIC3.7□□□□□ -1.82
USP11P51784 U6.115-201ENST00000636045 103 ntBASIC3.7□□□□□ -1.82
USP11P51784 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP11P51784 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP11P51784 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
USP11P51784 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms