Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU4-90P-201ENST00000362773 141 ntBASIC2.4□□□□□ -2.03
SOX2P48431 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
SOX2P48431 RNU6-1175P-201ENST00000365200 107 ntBASIC2.4□□□□□ -2.03
SOX2P48431 RNU6-1264P-201ENST00000383891 107 ntBASIC2.4□□□□□ -2.03
SOX2P48431 MT-TG-201ENST00000387429 68 ntBASIC2.4□□□□□ -2.03
SOX2P48431 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SOX2P48431 RNA5SP171-201ENST00000391071 115 ntBASIC2.4□□□□□ -2.03
SOX2P48431 RNA5SP475-201ENST00000410568 110 ntBASIC2.4□□□□□ -2.03
SOX2P48431 RNU2-32P-201ENST00000411193 191 ntBASIC2.4□□□□□ -2.03
SOX2P48431 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.4□□□□□ -2.03
SOX2P48431 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.4□□□□□ -2.03
SOX2P48431 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
SOX2P48431 SNORD127-201ENST00000458892 86 ntBASIC2.4□□□□□ -2.03
SOX2P48431 RNU6-496P-201ENST00000516145 99 ntBASIC2.4□□□□□ -2.03
SOX2P48431 SNORA48.11-201ENST00000517015 89 ntBASIC2.4□□□□□ -2.03
SOX2P48431 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.4□□□□□ -2.03
SOX2P48431 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.03
SOX2P48431 AC008873.1-201ENST00000625051 138 ntBASIC2.4□□□□□ -2.03
SOX2P48431 MIR3651-201ENST00000630427 90 ntBASIC2.4□□□□□ -2.03
SOX2P48431 MIR3674-201ENST00000636576 68 ntBASIC2.4□□□□□ -2.03
SOX2P48431 AC010615.1-201ENST00000594254 1764 ntBASIC2.4□□□□□ -2.03
SOX2P48431 SNORA38.1-201ENST00000364172 131 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RNU6-1305P-201ENST00000364353 104 ntBASIC2.39□□□□□ -2.03
SOX2P48431 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SOX2P48431 SNORA67.2-201ENST00000384300 149 ntBASIC2.39□□□□□ -2.03
SOX2P48431 MIR586-201ENST00000385035 97 ntBASIC2.39□□□□□ -2.03
SOX2P48431 MIR300-201ENST00000401138 83 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RNU4-30P-201ENST00000410245 143 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RNA5SP504-201ENST00000410676 117 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RPL23AP36-201ENST00000413895 458 ntBASIC2.39□□□□□ -2.03
SOX2P48431 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
SOX2P48431 AL445687.1-201ENST00000439946 251 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RNU6-1132P-201ENST00000459214 107 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RPL7P49-201ENST00000471402 708 ntBASIC2.39□□□□□ -2.03
SOX2P48431 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.39□□□□□ -2.03
SOX2P48431 RNU6-965P-201ENST00000516721 96 ntBASIC2.39□□□□□ -2.03
SOX2P48431 RNU6-1271P-201ENST00000517049 105 ntBASIC2.39□□□□□ -2.03
SOX2P48431 AC109329.2-201ENST00000519658 482 ntBASIC2.39□□□□□ -2.03
SOX2P48431 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.39□□□□□ -2.03
SOX2P48431 AC022616.8-201ENST00000533569 253 ntBASIC2.39□□□□□ -2.03
SOX2P48431 AC023157.2-201ENST00000540596 141 ntBASIC2.39□□□□□ -2.03
SOX2P48431 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SOX2P48431 AL355297.2-201ENST00000604792 129 ntBASIC2.39□□□□□ -2.03
SOX2P48431 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
SOX2P48431 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
SOX2P48431 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
SOX2P48431 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.39□□□□□ -2.03
SOX2P48431 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.39□□□□□ -2.03
SOX2P48431 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SOX2P48431 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.39□□□□□ -2.03
SOX2P48431 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SOX2P48431 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SOX2P48431 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.38□□□□□ -2.03
SOX2P48431 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SOX2P48431 MIR410-201ENST00000362222 80 ntBASIC2.38□□□□□ -2.03
SOX2P48431 U3.8-201ENST00000363675 217 ntBASIC2.38□□□□□ -2.03
SOX2P48431 RNU6-290P-201ENST00000365212 101 ntBASIC2.38□□□□□ -2.03
SOX2P48431 Y_RNA.518-201ENST00000384552 113 ntBASIC2.38□□□□□ -2.03
SOX2P48431 RNU6-851P-201ENST00000384565 107 ntBASIC2.38□□□□□ -2.03
SOX2P48431 MIR592-201ENST00000384959 97 ntBASIC2.38□□□□□ -2.03
SOX2P48431 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
SOX2P48431 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
SOX2P48431 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.38□□□□□ -2.03
SOX2P48431 AC003685.2-201ENST00000422795 395 ntBASIC2.38□□□□□ -2.03
SOX2P48431 NDUFB4P10-201ENST00000452541 359 ntBASIC2.38□□□□□ -2.03
SOX2P48431 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.38□□□□□ -2.03
SOX2P48431 AC107222.1-201ENST00000510899 637 ntBASIC2.38□□□□□ -2.03
SOX2P48431 SCARNA13-201ENST00000516672 275 ntBASIC2.38□□□□□ -2.03
SOX2P48431 RNU6-826P-201ENST00000516827 104 ntBASIC2.38□□□□□ -2.03
SOX2P48431 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.38□□□□□ -2.03
SOX2P48431 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SOX2P48431 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SOX2P48431 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.37□□□□□ -2.03
SOX2P48431 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SOX2P48431 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SOX2P48431 AC135776.4-201ENST00000624300 1904 ntBASIC2.37□□□□□ -2.03
SOX2P48431 MTND5P6-201ENST00000422338 1798 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AL391987.6-201ENST00000305671 199 ntBASIC2.37□□□□□ -2.03
SOX2P48431 RNU6-545P-201ENST00000362681 104 ntBASIC2.37□□□□□ -2.03
SOX2P48431 RNA5SP374-201ENST00000362939 125 ntBASIC2.37□□□□□ -2.03
SOX2P48431 RNU1-23P-201ENST00000363361 144 ntBASIC2.37□□□□□ -2.03
SOX2P48431 Y_RNA.307-201ENST00000365022 117 ntBASIC2.37□□□□□ -2.03
SOX2P48431 Y_RNA.331-201ENST00000365267 102 ntBASIC2.37□□□□□ -2.03
SOX2P48431 Y_RNA.350-201ENST00000365409 98 ntBASIC2.37□□□□□ -2.03
SOX2P48431 RNU6-102P-201ENST00000384485 104 ntBASIC2.37□□□□□ -2.03
SOX2P48431 Y_RNA.541-201ENST00000384640 113 ntBASIC2.37□□□□□ -2.03
SOX2P48431 MIR483-201ENST00000385070 76 ntBASIC2.37□□□□□ -2.03
SOX2P48431 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SOX2P48431 MIR1283-1-201ENST00000408494 87 ntBASIC2.37□□□□□ -2.03
SOX2P48431 RNU2-38P-201ENST00000410856 79 ntBASIC2.37□□□□□ -2.03
SOX2P48431 TOMM22P2-201ENST00000430735 237 ntBASIC2.37□□□□□ -2.03
SOX2P48431 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.37□□□□□ -2.03
SOX2P48431 AC074290.1-201ENST00000448883 135 ntBASIC2.37□□□□□ -2.03
SOX2P48431 HSPE1P25-201ENST00000455484 251 ntBASIC2.37□□□□□ -2.03
SOX2P48431 BX510359.1-201ENST00000456973 237 ntBASIC2.37□□□□□ -2.03
SOX2P48431 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.37□□□□□ -2.03
SOX2P48431 RN7SL807P-201ENST00000470923 297 ntBASIC2.37□□□□□ -2.03
SOX2P48431 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
SOX2P48431 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.37□□□□□ -2.03
SOX2P48431 AC055872.1-201ENST00000570978 278 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms