Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC005034.5-201ENST00000604219 466 ntBASIC2.75□□□□□ -1.97
COL15A1P39059 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
COL15A1P39059 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
COL15A1P39059 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
COL15A1P39059 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.74□□□□□ -1.97
COL15A1P39059 Y_RNA.459-201ENST00000384251 102 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 Y_RNA.526-201ENST00000384572 110 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 Y_RNA.557-201ENST00000384680 107 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU2-2P-201ENST00000410396 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-1328P-201ENST00000410938 106 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC113618.1-201ENST00000416747 285 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RPL30P4-201ENST00000429309 333 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 MTCO3P8-201ENST00000453691 755 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AP000870.1-201ENST00000472927 406 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-911P-201ENST00000516523 104 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 MIR2355-201ENST00000517199 87 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC016727.2-201ENST00000603988 621 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.15-201ENST00000611544 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.16-201ENST00000613119 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 MIR6845-201ENST00000613182 61 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.12-201ENST00000613778 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.20-201ENST00000613956 192 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.9-201ENST00000615427 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.11-201ENST00000616345 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.2-201ENST00000616535 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.3-201ENST00000617785 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.19-201ENST00000618602 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU2-1-201ENST00000618664 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.6-201ENST00000619225 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.5-201ENST00000619465 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U2.10-201ENST00000620268 191 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC138305.3-201ENST00000624988 240 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.74□□□□□ -1.97
COL15A1P39059 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL15A1P39059 SNORA38-201ENST00000363946 132 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-461P-201ENST00000364195 107 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 U8.10-201ENST00000384260 133 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-378P-201ENST00000384324 107 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 MIR487A-201ENST00000385009 80 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 MIR320B2-201ENST00000408479 138 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNA5SP181-201ENST00000410246 98 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 HMGB3P2-201ENST00000411913 584 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RPS26P42-201ENST00000413485 326 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 MICF-203ENST00000432679 129 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC112492.4-201ENST00000456549 352 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-764P-201ENST00000516396 105 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-295P-201ENST00000516901 104 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNA5SP54-201ENST00000516951 92 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-1137P-201ENST00000517073 99 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU6-58P-201ENST00000517143 103 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.74□□□□□ -1.97
COL15A1P39059 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
COL15A1P39059 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC124312.5-201ENST00000604451 268 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 AC069294.1-201ENST00000608397 350 ntBASIC2.74□□□□□ -1.97
COL15A1P39059 RNU4-15P-201ENST00000362613 141 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 RNU6-879P-201ENST00000364328 108 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 RNU6-450P-201ENST00000364654 107 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 Y_RNA.455-201ENST00000384230 98 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 SNORA51.11-201ENST00000384442 131 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 RNU6-985P-201ENST00000410182 104 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 WARS2P1-201ENST00000429678 537 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AL445305.1-201ENST00000432577 575 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AC023141.11-201ENST00000508864 202 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.73□□□□□ -1.97
COL15A1P39059 RNU6-1114P-201ENST00000516022 107 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 Y_RNA.720-201ENST00000517166 92 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.73□□□□□ -1.97
COL15A1P39059 AC040926.1-201ENST00000530195 238 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AC027288.2-201ENST00000553028 243 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 MIR5695-201ENST00000579717 85 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AC104695.3-201ENST00000604052 296 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 PCGEM1.1-201ENST00000613431 131 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.73□□□□□ -1.97
COL15A1P39059 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.73□□□□□ -1.97
COL15A1P39059 AC005296.1-201ENST00000616145 209 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AL449363.1-201ENST00000617815 186 ntBASIC2.73□□□□□ -1.97
COL15A1P39059 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL15A1P39059 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
COL15A1P39059 ZNF204P-201ENST00000416749 2397 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 RNU6-137P-201ENST00000363680 108 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 U3.9-201ENST00000363823 204 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 MIR29B2-201ENST00000385055 81 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 Y_RNA.645-201ENST00000391229 102 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 U6atac.2-201ENST00000408644 118 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 U8.22-201ENST00000459141 133 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 AC107032.1-201ENST00000485945 480 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
COL15A1P39059 AC022616.4-201ENST00000522985 181 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.72□□□□□ -1.97
COL15A1P39059 EIF4A1P12-201ENST00000551910 141 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 UBL5P4-201ENST00000562584 236 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
COL15A1P39059 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms