Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CLCN1P35523 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN1P35523 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN1P35523 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN1P35523 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLCN1P35523 RNU6-283P-201ENST00000364788 107 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 RNU6-438P-201ENST00000365561 103 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 SNORA22-201ENST00000383907 134 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 AC006011.1-201ENST00000442758 349 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 AL158147.1-201ENST00000443970 75 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 SNRPGP3-201ENST00000469405 227 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 AC110768.1-201ENST00000509222 400 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 MRPS36P2-201ENST00000512569 299 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 RNU6-1061P-201ENST00000516530 99 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 MIR3121-201ENST00000579680 77 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 MIR3138-201ENST00000585238 82 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 AL929325.1-201ENST00000603096 117 ntBASIC4.43□□□□□ -1.7
CLCN1P35523 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLCN1P35523 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN1P35523 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN1P35523 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN1P35523 AC009487.4-201ENST00000624969 3585 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 Z82209.1-201ENST00000422141 2135 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN1P35523 RNU6-117P-201ENST00000365415 107 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 SNORD18B-201ENST00000365659 72 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RNU6-1235P-201ENST00000384559 107 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 MLLT10P1-201ENST00000418346 262 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 DBIP2-201ENST00000419076 262 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 AC009414.1-201ENST00000427200 443 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RNU6-498P-201ENST00000459468 107 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RN7SL271P-201ENST00000487601 295 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 AC026402.1-201ENST00000513642 170 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RNU6-589P-201ENST00000516485 107 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RNU7-143P-201ENST00000516781 65 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 RNU6-586P-201ENST00000517265 104 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 AC008011.1-201ENST00000545989 227 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCN1P35523 RPL23AP91-201ENST00000569211 455 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 MIR2681-201ENST00000581814 105 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 AC131055.1-201ENST00000584626 316 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 MIR3653-201ENST00000625572 110 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 AC068724.3-201ENST00000625906 87 ntBASIC4.42□□□□□ -1.7
CLCN1P35523 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLCN1P35523 AC103988.1-201ENST00000566382 2177 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN1P35523 RNU6-1240P-201ENST00000365155 104 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 MIR23B-201ENST00000384832 97 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 SNORA40.5-201ENST00000391061 128 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 SNORA48.7-201ENST00000391302 135 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 AC004975.1-201ENST00000428733 208 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN1P35523 AC016925.1-201ENST00000458303 298 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 AC010401.1-201ENST00000463867 348 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 RNA5SP153-201ENST00000516498 76 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 AC108081.1-201ENST00000604358 221 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 uc_338.4-201ENST00000616635 176 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 MIR7151-201ENST00000617477 60 ntBASIC4.41□□□□□ -1.7
CLCN1P35523 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
CLCN1P35523 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN1P35523 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.4□□□□□ -1.7
CLCN1P35523 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLCN1P35523 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCN1P35523 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.4□□□□□ -1.7
CLCN1P35523 RNA5SP295-201ENST00000362655 121 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 Y_RNA.114-201ENST00000363265 113 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 Y_RNA.203-201ENST00000364106 102 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 RPL23AP46-201ENST00000438548 490 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 HMGN2P7-201ENST00000456186 273 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 SCARNA17.1-201ENST00000516211 143 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 SCARNA17.2-201ENST00000516334 143 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 SCARNA17.4-201ENST00000614296 143 ntBASIC4.4□□□□□ -1.71
CLCN1P35523 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
CLCN1P35523 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN1P35523 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCN1P35523 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN1P35523 AP003122.5-201ENST00000527668 3766 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 MIR383-201ENST00000362257 73 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 RNU6-755P-201ENST00000364400 103 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 RNA5SP293-201ENST00000410527 113 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 RPL30P4-201ENST00000429309 333 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCN1P35523 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLCN1P35523 SNORD33.1-201ENST00000516213 88 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 CYCSP29-201ENST00000533731 318 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 RN7SL600P-201ENST00000581811 299 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 AL591424.2-201ENST00000617023 128 ntBASIC4.39□□□□□ -1.71
CLCN1P35523 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN1P35523 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLCN1P35523 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN1P35523 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN1P35523 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CLCN1P35523 MTND5P32-201ENST00000560711 1802 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RNU6-1298P-201ENST00000362456 101 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 Y_RNA.91-201ENST00000363042 107 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 Y_RNA.634-201ENST00000364811 113 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RPS26P8-201ENST00000393490 348 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 AC016909.1-201ENST00000415916 166 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RPS27P29-201ENST00000463110 252 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RN7SL442P-201ENST00000473804 320 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms