Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 snoZ196.1-201ENST00000625269 89 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 AC007671.2-201ENST00000637344 619 ntBASIC0.28□□□□□ -2.36
CASQ1P31415 RNU6-500P-201ENST00000362349 107 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 RNU5E-5P-201ENST00000365379 116 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 RNU6-393P-201ENST00000384475 107 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 RNU6-1067P-201ENST00000384752 107 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 RPS3AP3-201ENST00000411933 242 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 AC244098.3-201ENST00000424803 96 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.27□□□□□ -2.37
CASQ1P31415 RPS29P15-201ENST00000458329 171 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 RNU6-1110P-201ENST00000516462 101 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 AC022878.1-201ENST00000530684 149 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
CASQ1P31415 AK6P2-201ENST00000549020 471 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 MIR4498-201ENST00000577599 66 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 FAM106DP-201ENST00000586416 501 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 AL512605.2-201ENST00000592972 256 ntBASIC0.27□□□□□ -2.37
CASQ1P31415 RNU6-424P-201ENST00000384367 105 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 MIR1-2-201ENST00000384961 85 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 SNORD73A-201ENST00000386062 65 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 MIR454-201ENST00000390180 115 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 U8.16-201ENST00000391279 133 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 RNU6-1186P-201ENST00000410429 97 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 RNU6-321P-201ENST00000410912 106 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.26□□□□□ -2.37
CASQ1P31415 SSR1P2-201ENST00000415208 787 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 AL008987.1-201ENST00000415528 237 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 RNU6-221P-201ENST00000459541 99 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 AP003716.2-201ENST00000528260 108 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 PCMTD1P2-201ENST00000565017 355 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 AC104984.5-201ENST00000586878 94 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 AL136317.1-201ENST00000612653 226 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 MIR6715A-201ENST00000615929 79 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 AC008873.1-201ENST00000625051 138 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 OR4G1P-203ENST00000641984 1631 ntBASIC0.26□□□□□ -2.37
CASQ1P31415 MIR337-201ENST00000362281 93 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 RNU6-793P-201ENST00000384233 104 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 MIR450B-201ENST00000401182 78 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 RNU6-195P-201ENST00000411352 109 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 RPS26P42-201ENST00000413485 326 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 RPL23AP50-201ENST00000434149 455 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.25□□□□□ -2.37
CASQ1P31415 STAG3L5P-204ENST00000443759 179 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 USP9YP12-201ENST00000450481 570 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.25□□□□□ -2.37
CASQ1P31415 MTND4LP26-201ENST00000518144 282 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.25□□□□□ -2.37
CASQ1P31415 MRPS36P4-201ENST00000534436 298 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.25□□□□□ -2.37
CASQ1P31415 AC023827.1-201ENST00000569247 97 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 MIR5583-1-201ENST00000580941 59 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC131055.1-201ENST00000584626 316 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC234772.3-201ENST00000602277 528 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AP000907.4-201ENST00000604143 237 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC092354.1-201ENST00000606057 376 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 RMST_3.1-201ENST00000611651 109 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 AC100810.6-201ENST00000638068 285 ntBASIC0.25□□□□□ -2.37
CASQ1P31415 SNORA36.2-201ENST00000384004 127 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC106883.1-201ENST00000418805 562 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.24□□□□□ -2.37
CASQ1P31415 AL162725.1-201ENST00000435405 301 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.24□□□□□ -2.37
CASQ1P31415 AF186996.7-201ENST00000492781 209 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 RNA5SP454-201ENST00000517231 127 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC022868.1-201ENST00000517767 391 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 MTND4P33-201ENST00000556706 766 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 MIR4703-201ENST00000577728 79 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC011195.1-201ENST00000578177 177 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AL117336.2-201ENST00000602435 335 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC068790.2-201ENST00000602601 557 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AL158050.2-201ENST00000605336 568 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC122133.1-201ENST00000613964 233 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AL133173.2-201ENST00000614270 90 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 U6.73-201ENST00000619194 103 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC068787.1-201ENST00000623908 691 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AL078596.1-201ENST00000624856 447 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 AC006927.3-201ENST00000638789 384 ntBASIC0.24□□□□□ -2.37
CASQ1P31415 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 RNU6-137P-201ENST00000363680 108 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 Y_RNA.330-201ENST00000365230 109 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 RNU6-434P-201ENST00000384376 107 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 MIR526A1-201ENST00000384897 85 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 RNA5SP222-201ENST00000411039 105 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 AC104332.1-201ENST00000440471 797 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.23□□□□□ -2.37
CASQ1P31415 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.23□□□□□ -2.37
CASQ1P31415 SCARNA18-201ENST00000459004 134 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 AC007215.1-201ENST00000464893 276 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.23□□□□□ -2.37
CASQ1P31415 OR9P1P-201ENST00000496431 281 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.23□□□□□ -2.37
CASQ1P31415 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.23□□□□□ -2.37
CASQ1P31415 AP003072.2-201ENST00000527756 676 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.23□□□□□ -2.37
CASQ1P31415 MIR4509-3-201ENST00000578671 94 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 MIR4509-2-201ENST00000583920 94 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 RSL24D1P11-201ENST00000591045 491 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 BNIP3P39-201ENST00000601077 554 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms