Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SNORA33-201ENST00000363664 130 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 SNORD31B-201ENST00000364977 69 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 SNORA12-201ENST00000391162 147 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 AL663109.1-201ENST00000411498 844 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.52□□□□□ -2.65
CPS1P31327 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
CPS1P31327 AC093303.1-201ENST00000514549 295 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 AC009902.1-201ENST00000519351 183 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.52□□□□□ -2.65
CPS1P31327 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
CPS1P31327 AL590396.2-201ENST00000636511 1041 ntBASIC-1.52□□□□□ -2.65
CPS1P31327 SEC63P2-201ENST00000503863 1939 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.53□□□□□ -2.65
CPS1P31327 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.53□□□□□ -2.65
CPS1P31327 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-1.53□□□□□ -2.65
CPS1P31327 AC007215.1-201ENST00000464893 276 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 CR383656.4-201ENST00000546909 122 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 AC023824.3-201ENST00000569003 562 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 AL162424.1-201ENST00000602325 221 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 AC090186.1-201ENST00000605991 572 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 AC007684.1-201ENST00000609671 477 ntBASIC-1.53□□□□□ -2.65
CPS1P31327 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.54□□□□□ -2.66
CPS1P31327 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.54□□□□□ -2.66
CPS1P31327 RNU6-40P-201ENST00000384254 107 ntBASIC-1.54□□□□□ -2.66
CPS1P31327 RNU6-440P-201ENST00000390882 105 ntBASIC-1.54□□□□□ -2.66
CPS1P31327 USP9YP21-201ENST00000420603 432 ntBASIC-1.54□□□□□ -2.66
CPS1P31327 AC023442.1-201ENST00000531247 422 ntBASIC-1.54□□□□□ -2.66
CPS1P31327 RNY4P27-201ENST00000363341 96 ntBASIC-1.55□□□□□ -2.66
CPS1P31327 SNORA2B-201ENST00000384583 137 ntBASIC-1.55□□□□□ -2.66
CPS1P31327 AC006366.1-201ENST00000422002 759 ntBASIC-1.55□□□□□ -2.66
CPS1P31327 RN7SKP164-201ENST00000516138 266 ntBASIC-1.55□□□□□ -2.66
CPS1P31327 RNU6-811P-201ENST00000384069 107 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 MIR563-201ENST00000385080 79 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 RNU6-932P-201ENST00000391108 106 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 RPS20P2-201ENST00000402520 389 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.56□□□□□ -2.66
CPS1P31327 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 MIR655-201ENST00000362159 97 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 TIMM9P3-201ENST00000428659 274 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 MTCO1P5-201ENST00000433573 344 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 HSFY5P-201ENST00000453726 309 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 RNU6-158P-201ENST00000517104 100 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 AL391840.1-201ENST00000571144 367 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 AL442067.1-201ENST00000613261 223 ntBASIC-1.56□□□□□ -2.66
CPS1P31327 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 SNORD32A-201ENST00000364805 84 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.57□□□□□ -2.66
CPS1P31327 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 AC105029.1-201ENST00000520250 669 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.57□□□□□ -2.66
CPS1P31327 MIR4804-201ENST00000581683 73 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 AL606834.3-201ENST00000602615 496 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 AC022217.4-201ENST00000604389 163 ntBASIC-1.57□□□□□ -2.66
CPS1P31327 SNORA72.1-201ENST00000363485 129 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 RNU4-16P-201ENST00000364737 141 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.58□□□□□ -2.66
CPS1P31327 AP000870.1-201ENST00000472927 406 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 AC010424.1-201ENST00000506336 297 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 SNORD116-30-201ENST00000516468 85 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 AC125232.2-201ENST00000592457 143 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 AC018889.1-201ENST00000605372 397 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 MIR6514-201ENST00000622549 70 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 AC099654.9-201ENST00000637055 678 ntBASIC-1.58□□□□□ -2.66
CPS1P31327 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.58□□□□□ -2.66
CPS1P31327 snoZ40.1-201ENST00000364540 72 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 AL590084.2-201ENST00000401481 382 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 AC007000.2-201ENST00000442564 487 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 MTCO3P27-201ENST00000514397 196 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 SNORA31.19-201ENST00000517079 126 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.59□□□□□ -2.66
CPS1P31327 AC078795.3-201ENST00000602913 472 ntBASIC-1.59□□□□□ -2.66
CPS1P31327 MIR148A-201ENST00000362215 68 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 RNU6-223P-201ENST00000362830 107 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 RNU6-77P-201ENST00000410554 91 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.6□□□□□ -2.67
CPS1P31327 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 AL139824.2-201ENST00000458731 1095 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 MIR3152-201ENST00000579801 74 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 MIR7107-201ENST00000611489 80 ntBASIC-1.6□□□□□ -2.67
CPS1P31327 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 SNORA40C-201ENST00000391285 128 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 MIR3115-201ENST00000577915 68 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 BX322639.1-202ENST00000423987 2213 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 RNU4-15P-201ENST00000362613 141 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 AC016831.2-201ENST00000417179 352 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 RPL21P38-201ENST00000418090 167 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 RNU7-14P-201ENST00000459331 62 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 RN7SKP19-201ENST00000516016 252 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms