Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.54□□□□□ -2
HOXA11P31270 PTGES3P4-201ENST00000426243 356 ntBASIC2.54□□□□□ -2
HOXA11P31270 AL356320.1-201ENST00000429616 163 ntBASIC2.54□□□□□ -2
HOXA11P31270 USP9YP16-201ENST00000430287 407 ntBASIC2.54□□□□□ -2
HOXA11P31270 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
HOXA11P31270 USP9YP23-201ENST00000455085 407 ntBASIC2.54□□□□□ -2
HOXA11P31270 RNU6-1132P-201ENST00000459214 107 ntBASIC2.54□□□□□ -2
HOXA11P31270 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.54□□□□□ -2
HOXA11P31270 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.54□□□□□ -2
HOXA11P31270 MTND1P19-201ENST00000511780 315 ntBASIC2.54□□□□□ -2
HOXA11P31270 RNU6-1114P-201ENST00000516022 107 ntBASIC2.54□□□□□ -2
HOXA11P31270 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.54□□□□□ -2
HOXA11P31270 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.54□□□□□ -2
HOXA11P31270 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.54□□□□□ -2
HOXA11P31270 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.54□□□□□ -2
HOXA11P31270 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.54□□□□□ -2
HOXA11P31270 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
HOXA11P31270 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.54□□□□□ -2
HOXA11P31270 U6.104-201ENST00000637979 90 ntBASIC2.54□□□□□ -2
HOXA11P31270 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXA11P31270 AC010615.1-201ENST00000594254 1764 ntBASIC2.54□□□□□ -2
HOXA11P31270 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXA11P31270 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.53□□□□□ -2
HOXA11P31270 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2
HOXA11P31270 AC002543.1-201ENST00000299783 1954 ntBASIC2.53□□□□□ -2
HOXA11P31270 MIR335-201ENST00000362173 94 ntBASIC2.53□□□□□ -2
HOXA11P31270 Y_RNA.14-201ENST00000362415 103 ntBASIC2.53□□□□□ -2
HOXA11P31270 U8.2-201ENST00000363156 134 ntBASIC2.53□□□□□ -2
HOXA11P31270 MIR544A-201ENST00000384855 91 ntBASIC2.53□□□□□ -2
HOXA11P31270 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.53□□□□□ -2
HOXA11P31270 U6atac.2-201ENST00000408644 118 ntBASIC2.53□□□□□ -2
HOXA11P31270 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
HOXA11P31270 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.53□□□□□ -2
HOXA11P31270 EIF4EP4-201ENST00000424916 578 ntBASIC2.53□□□□□ -2
HOXA11P31270 AC096638.1-201ENST00000444678 216 ntBASIC2.53□□□□□ -2
HOXA11P31270 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.53□□□□□ -2
HOXA11P31270 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
HOXA11P31270 TOMM22P6-201ENST00000465035 409 ntBASIC2.53□□□□□ -2
HOXA11P31270 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
HOXA11P31270 AC021231.3-201ENST00000558497 370 ntBASIC2.53□□□□□ -2
HOXA11P31270 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
HOXA11P31270 AC105245.1-201ENST00000581934 244 ntBASIC2.53□□□□□ -2
HOXA11P31270 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
HOXA11P31270 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HOXA11P31270 LINC02555-201ENST00000563933 1951 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXA11P31270 RBBP8P1-201ENST00000449447 1844 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 RNU6-318P-201ENST00000384283 103 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 SNORD78.2-201ENST00000391076 69 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 SNORD58.1-201ENST00000391313 66 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXA11P31270 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXA11P31270 AC244670.1-201ENST00000436879 112 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXA11P31270 HMGB3P3-201ENST00000510526 400 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 RNU6-1023P-201ENST00000516137 106 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 RNU6-397P-201ENST00000516226 104 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 Y_RNA.680-201ENST00000516441 93 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 RNU6-1198P-201ENST00000516904 67 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC115990.1-201ENST00000526957 301 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXA11P31270 HSPE1P4-201ENST00000550617 308 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC136932.1-201ENST00000574771 208 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXA11P31270 AC090425.1-201ENST00000610007 140 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC005520.5-201ENST00000613926 164 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AC240442.1-201ENST00000616055 283 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 AP001282.2-201ENST00000616149 309 ntBASIC2.52□□□□□ -2.01
HOXA11P31270 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXA11P31270 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXA11P31270 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXA11P31270 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6-222P-201ENST00000362438 107 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6-1010P-201ENST00000362757 107 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 SNORD81.1-201ENST00000363064 77 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 Y_RNA.257-201ENST00000364596 102 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 Y_RNA.439-201ENST00000384119 94 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 SNORD63-201ENST00000384262 68 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 MIR32-201ENST00000384965 70 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 MIR10B-201ENST00000385011 110 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6-159P-201ENST00000391080 106 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6-1093P-201ENST00000391194 107 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RNU6-1203P-201ENST00000410703 110 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RPL21P38-201ENST00000418090 167 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 Z98742.2-201ENST00000431564 187 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 RPS15AP28-201ENST00000435088 386 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 AL121890.1-201ENST00000435457 205 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXA11P31270 AC007215.1-201ENST00000464893 276 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 AP000870.1-201ENST00000472927 406 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 TRBVB-201ENST00000477100 408 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXA11P31270 MIR1273D-201ENST00000577266 86 ntBASIC2.51□□□□□ -2.01
HOXA11P31270 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms