Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 AC010469.2-201ENST00000496412 480 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.04□□□□□ -1.92
CNGA1P29973 RNU6-237P-201ENST00000515985 71 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 MIR4524B-201ENST00000581569 115 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 RPS29P30-201ENST00000600975 111 ntBASIC3.04□□□□□ -1.92
CNGA1P29973 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CNGA1P29973 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.03□□□□□ -1.92
CNGA1P29973 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 SNORA63C-201ENST00000364578 129 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 SNORD31B-201ENST00000364977 69 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 SNORA51.11-201ENST00000384442 131 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 SNORD78.2-201ENST00000391076 69 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 SNORD12B-201ENST00000410433 91 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 HMGN2P18-201ENST00000450680 270 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.03□□□□□ -1.92
CNGA1P29973 Y_RNA.638-201ENST00000459374 113 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.03□□□□□ -1.92
CNGA1P29973 CYCSP23-201ENST00000519781 313 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.03□□□□□ -1.92
CNGA1P29973 PRELID2P1-201ENST00000552837 301 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 AL357075.2-201ENST00000614906 189 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 AC068205.3-201ENST00000636385 468 ntBASIC3.03□□□□□ -1.92
CNGA1P29973 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CNGA1P29973 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CNGA1P29973 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CNGA1P29973 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CNGA1P29973 RNU6-727P-201ENST00000363592 107 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 RNU6-743P-201ENST00000364151 106 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 RNU4-50P-201ENST00000364361 141 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 Y_RNA.389-201ENST00000383924 113 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 Y_RNA.455-201ENST00000384230 98 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 RNU6-738P-201ENST00000384531 106 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 Y_RNA.527-201ENST00000384573 102 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 SNORA67.4-201ENST00000384688 142 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 MIR586-201ENST00000385035 97 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 MIR300-201ENST00000401138 83 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AL033519.2-201ENST00000403958 392 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 SNORA3.2-201ENST00000408221 125 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 RNU6-985P-201ENST00000410182 104 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.02□□□□□ -1.93
CNGA1P29973 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
CNGA1P29973 AC009963.1-201ENST00000417265 157 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AC016925.1-201ENST00000458303 298 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 RNA5SP490-201ENST00000517141 136 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 RRN3P3-201ENST00000549207 578 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 MIR3605-201ENST00000583214 100 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AL390123.1-201ENST00000603216 237 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AC124312.5-201ENST00000604451 268 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.02□□□□□ -1.93
CNGA1P29973 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.02□□□□□ -1.93
CNGA1P29973 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.02□□□□□ -1.93
CNGA1P29973 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNGA1P29973 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CNGA1P29973 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.01□□□□□ -1.93
CNGA1P29973 RNU6-545P-201ENST00000362681 104 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 SNORA38-201ENST00000363946 132 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 SNORD114-30-201ENST00000364448 72 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 RNU6-450P-201ENST00000364654 107 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 Y_RNA.415-201ENST00000384012 112 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 RNU6-1026P-201ENST00000384465 108 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 RNU1-148P-201ENST00000384472 162 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 RNU6-101P-201ENST00000410323 104 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.01□□□□□ -1.93
CNGA1P29973 FCF1P4-201ENST00000448326 183 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.01□□□□□ -1.93
CNGA1P29973 AC074133.1-201ENST00000515696 183 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 AC113195.1-201ENST00000579952 141 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 AL121655.1-201ENST00000605811 308 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 ZNF658B-202ENST00000615961 3375 ntBASIC3.01□□□□□ -1.93
CNGA1P29973 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.01□□□□□ -1.93
CNGA1P29973 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
CNGA1P29973 MRPL35P1-201ENST00000404272 572 ntBASIC3□□□□□ -1.93
CNGA1P29973 MIR1283-1-201ENST00000408494 87 ntBASIC3□□□□□ -1.93
CNGA1P29973 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3□□□□□ -1.93
CNGA1P29973 RPL19P1-201ENST00000411635 428 ntBASIC3□□□□□ -1.93
CNGA1P29973 AC113618.1-201ENST00000416747 285 ntBASIC3□□□□□ -1.93
CNGA1P29973 PCNPP5-201ENST00000452246 481 ntBASIC3□□□□□ -1.93
CNGA1P29973 HMGN2P9-201ENST00000476875 229 ntBASIC3□□□□□ -1.93
CNGA1P29973 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3□□□□□ -1.93
CNGA1P29973 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
CNGA1P29973 SNORA40.9-201ENST00000515895 93 ntBASIC3□□□□□ -1.93
CNGA1P29973 SNORA9.3-201ENST00000516383 129 ntBASIC3□□□□□ -1.93
CNGA1P29973 RNU6-764P-201ENST00000516396 105 ntBASIC3□□□□□ -1.93
CNGA1P29973 RNU1-117P-201ENST00000517041 158 ntBASIC3□□□□□ -1.93
CNGA1P29973 Y_RNA.715-201ENST00000517082 110 ntBASIC3□□□□□ -1.93
CNGA1P29973 CYCSP26-201ENST00000534107 320 ntBASIC3□□□□□ -1.93
CNGA1P29973 AC004486.1-201ENST00000546846 233 ntBASIC3□□□□□ -1.93
CNGA1P29973 MIR4769-201ENST00000584126 77 ntBASIC3□□□□□ -1.93
CNGA1P29973 AL360085.1-201ENST00000604713 532 ntBASIC3□□□□□ -1.93
CNGA1P29973 AC010205.1-201ENST00000616668 449 ntBASIC3□□□□□ -1.93
CNGA1P29973 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3□□□□□ -1.93
CNGA1P29973 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CNGA1P29973 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CNGA1P29973 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CNGA1P29973 RNA5SP289-201ENST00000362332 137 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 VTRNA1-1-201ENST00000363120 99 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 Y_RNA.332-201ENST00000365271 113 ntBASIC2.99□□□□□ -1.93
CNGA1P29973 SNORA63.7-201ENST00000365579 123 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 331.5 ms